RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 ENPP4Q9Y6X5 453 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 COL4A2P08572 1712 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 PRUNE2Q8WUY3 3088 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 LOC105369274A0A096LPK9 316 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 LOC102723532A0A0G2JNH3 316 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 A0A0G2JPF8 293 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 VGLL3A8MV65 326 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 HNRNPCL2B2RXH8 293 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 HNRNPCL3B7ZW38 293 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 ASNA1O43681 348 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 SLC28A2O43868 658 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 B4GALT2O60909 372 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 UBXN7O94888 489 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 CLIC3O95833 236 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 AGR2O95994 175 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 OPN1SWP03999 348 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 WNT1P04628 370 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 IFNW1P05000 195 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 EIF2S1P05198 315 aaKnown RBP5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 BCHEP06276 602 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 FESP07332 822 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 CELA2BP08218 269 aaPredicted RBP5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 C8orf89P0DMQ9 161 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 HNRNPCL4P0DMR1 293 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 OR12D1P0DN82 309 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 ETS2P15036 469 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 NELFEP18615 380 aaKnown RBP5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 CDH3P22223 829 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 RRM2P31350 389 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 TTKP33981 857 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 XCR1P46094 333 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 LSSP48449 732 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 KCNJ5P48544 419 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 PXNP49023 591 aaPredicted RBP5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 CRISP3P54108 245 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 PRKAG1P54619 331 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 LIM2P55344 173 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 PRSS12P56730 875 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 SMIM11AP58511 58 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 RPS26P62854 115 aaKnown RBP5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 SKP1P63208 163 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 TNFRSF17Q02223 184 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 RUNX2Q13950 521 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 KEAP1Q14145 624 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 DUSP7Q16829 419 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 C6orf141Q5SZD1 244 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 FRMPD2BQ6IN97 320 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 FAHD1Q6P587 224 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 BORAQ6PGQ7 559 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 OGFOD3Q6PK18 319 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 USP53Q70EK8 1073 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 CEP68Q76N32 757 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 RNF44Q7L0R7 432 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 SATL1Q86VE3 508 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 TSPYL5Q86VY4 417 aaPredicted RBP5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 CYP4Z1Q86W10 505 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 SLC44A2Q8IWA5 706 aaPredicted RBP5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 OFCC1Q8IZS5 231 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 OR4N4Q8N0Y3 316 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 LRRC25Q8N386 305 aaPredicted RBP5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 ARL14Q8N4G2 192 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 DEFB119Q8N690 84 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 SMYD1Q8NB12 490 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 BBS10Q8TAM1 723 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 LMX1AQ8TE12 382 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 HDAC2Q92769 488 aaKnown RBP5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 TANKQ92844 425 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 RAB8BQ92930 207 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 ELP4Q96EB1 424 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 TMEM19Q96HH6 336 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 MAGED4Q96JG8 741 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 C10orf90Q96M02 699 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 MBOAT4Q96T53 435 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 APOL4Q9BPW4 351 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 CCDC3Q9BQI4 270 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 IER2Q9BTL4 223 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 FAM117AQ9C073 453 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 GRIP2Q9C0E4 1043 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 SOX17Q9H6I2 414 aaPredicted RBP5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 SYNPO2LQ9H987 977 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 TBC1D17Q9HA65 648 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 VNN3Q9NY84 501 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 CALML5Q9NZT1 146 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 NTMQ9P121 344 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 KIF17Q9P2E2 1029 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 TRPC4Q9UBN4 977 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 POMT2Q9UKY4 750 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 BLOC1S6Q9UL45 172 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 LIPT1Q9Y234 373 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 SH3GLB1Q9Y371 365 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 LYVE1Q9Y5Y7 322 aa5.91□□□□□ -1.46
GTF3C3-202ENST00000409364 LILRA5A6NI73 299 aa5.9□□□□□ -1.47
GTF3C3-202ENST00000409364 B4DGG1 531 aa5.9□□□□□ -1.47
GTF3C3-202ENST00000409364 LMO7DNF2Z398 122 aa5.9□□□□□ -1.47
GTF3C3-202ENST00000409364 BCKDKO14874 412 aa5.9□□□□□ -1.47
GTF3C3-202ENST00000409364 P2RX6O15547 441 aa5.9□□□□□ -1.47
GTF3C3-202ENST00000409364 AQP9O43315 295 aa5.9□□□□□ -1.47
GTF3C3-202ENST00000409364 GALR3O60755 368 aaPredicted RBP5.9□□□□□ -1.47
GTF3C3-202ENST00000409364 PRAMEF10O60809 474 aa5.9□□□□□ -1.47
GTF3C3-202ENST00000409364 PRKRAO75569 313 aaKnown RBP5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms