RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 RPF2Q9H7B2 306 aaKnown RBP15.19■□□□□ 0.02
CHMP3-203ENST00000409225 DNAJC11Q9NVH1 559 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 ZNF226Q9NYT6 803 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 GPRC5BQ9NZH0 403 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 CTNNAL1Q9UBT7 734 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 PACSIN3Q9UKS6 424 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 CORO1CQ9ULV4 474 aaPredicted RBP15.19■□□□□ 0.02
CHMP3-203ENST00000409225 DSCAMO60469 2012 aa15.19■□□□□ 0.02
CHMP3-203ENST00000409225 SAP18O00422 153 aaKnown RBP15.18■□□□□ 0.02
CHMP3-203ENST00000409225 OR10H2O60403 315 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 PRKRAO75569 313 aaKnown RBP15.18■□□□□ 0.02
CHMP3-203ENST00000409225 TTC4O95801 387 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 ACTL6AO96019 429 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 CD22P20273 847 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 PTMSP20962 102 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 CXCR5P32302 372 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 GCKP35557 465 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 MC3RP41968 323 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 AP5B1Q2VPB7 878 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 TEDDM1Q5T9Z0 273 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 NKAPQ8N5F7 415 aaKnown RBP15.18■□□□□ 0.02
CHMP3-203ENST00000409225 WNT2BQ93097 391 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 PTCD3Q96EY7 689 aaKnown RBP15.18■□□□□ 0.02
CHMP3-203ENST00000409225 HS3ST6Q96QI5 342 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 MED18Q9BUE0 208 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 SORBS1Q9BX66 1292 aaKnown RBP15.18■□□□□ 0.02
CHMP3-203ENST00000409225 MS4A8Q9BY19 250 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 PHACTR1Q9C0D0 580 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 ACBD3Q9H3P7 528 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 EHD1Q9H4M9 534 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 WWOXQ9NZC7 414 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 WIF1Q9Y5W5 379 aa15.18■□□□□ 0.02
CHMP3-203ENST00000409225 CUBNO60494 3623 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 C2orf92A0A1B0GVN3 265 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 OR6C76A6NM76 312 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 SMNDC1O75940 238 aaKnown RBP eCLIP15.17■□□□□ 0.02
CHMP3-203ENST00000409225 SCELO95171 688 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 CLPSP04118 112 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 CPN1P15169 458 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 CRYGSP22914 178 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 PTPN6P29350 595 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 CASP3P42574 277 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 NR1H2P55055 460 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 BIKQ13323 160 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 SPRED3Q2MJR0 410 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 C18orf63Q68DL7 685 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 TIGD3Q6B0B8 471 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 ADAMTSL2Q86TH1 951 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 PRR22Q8IZ63 422 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 ST13P4Q8IZP2 240 aaPredicted RBP15.17■□□□□ 0.02
CHMP3-203ENST00000409225 OR1J4Q8NGS1 313 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 ANKRD7Q92527 254 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 TANKQ92844 425 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 MAGOHBQ96A72 148 aaKnown RBP15.17■□□□□ 0.02
CHMP3-203ENST00000409225 TMEM41AQ96HV5 264 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 VPS39Q96JC1 886 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 FAM111AQ96PZ2 611 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 TMEM79Q9BSE2 394 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 EFCAB11Q9BUY7 163 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 SNX15Q9NRS6 342 aa15.17■□□□□ 0.02
CHMP3-203ENST00000409225 RYDENQ9NUL5 291 aaKnown RBP15.17■□□□□ 0.02
CHMP3-203ENST00000409225 TAPBPO15533 448 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 TGFB1P01137 390 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 RPP38P78345 283 aaKnown RBP15.16■□□□□ 0.02
CHMP3-203ENST00000409225 PCDH1Q08174 1060 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 DMTNQ08495 405 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 SLAMF1Q13291 335 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 GAB1Q13480 694 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 SETDB1Q15047 1291 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 HIST2H2ACQ16777 129 aaPredicted RBP15.16■□□□□ 0.02
CHMP3-203ENST00000409225 KBTBD12Q3ZCT8 623 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 HLA-DQA1Q5Y7H0 255 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 HIST2H2AA3Q6FI13 130 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 PODNL1Q6PEZ8 512 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 ANGPTL8Q6UXH0 198 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 ADGRE4PQ86SQ3 457 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 IGDCC3Q8IVU1 814 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 PPIL6Q8IXY8 311 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 MAPK1IP1LQ8NDC0 245 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 ZNF473Q8WTR7 871 aaKnown RBP15.16■□□□□ 0.02
CHMP3-203ENST00000409225 ANKRD49Q8WVL7 239 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 RIT1Q92963 219 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 ESAMQ96AP7 390 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 ZC3HAV1LQ96H79 300 aaKnown RBP15.16■□□□□ 0.02
CHMP3-203ENST00000409225 CLCF1Q9UBD9 225 aa15.16■□□□□ 0.02
CHMP3-203ENST00000409225 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 A0A1W2PNV4 684 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 WASHC1A8K0Z3 465 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 MSTNO14793 375 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 TNFSF13O75888 250 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 IFNA2P01563 188 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 PCNAP12004 261 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 SSTR4P31391 388 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 HSPA7P48741 367 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 TMED10P49755 219 aaKnown RBP15.15■□□□□ 0.02
CHMP3-203ENST00000409225 TNFRSF17Q02223 184 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 TNK1Q13470 666 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 LAPTM5Q13571 262 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 TGFBIQ15582 683 aa15.15■□□□□ 0.02
CHMP3-203ENST00000409225 MSS51Q4VC12 460 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms