RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 SLCO4C1Q6ZQN7 724 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 FAM83FQ8NEG4 500 aaPredicted RBP11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 ACTRT1Q8TDG2 376 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 TMEM171Q8WVE6 324 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 FBXL20Q96IG2 436 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 DGAT2Q96PD7 388 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 WWTR1Q9GZV5 400 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 ACBD3Q9H3P7 528 aa11.7□□□□□ -0.54
CHRNA1-203ENST00000409219 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 MSTNO14793 375 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 CD5LO43866 347 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 C1GALT1C1LP0DN25 315 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 CPN1P15169 458 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 GABRB3P28472 473 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 MAGEA6P43360 314 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 FBXW4P57775 412 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 IL2P60568 153 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 VEZF1Q14119 521 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 EBPQ15125 230 aaKnown RBP11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 CCNG2Q16589 344 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 TMEM64Q6YI46 380 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 SLC29A4Q7RTT9 530 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 GSTA5Q7RTV2 222 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 HDXQ7Z353 690 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 ZNF550Q7Z398 422 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 OR4N5Q8IXE1 308 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 AGGF1Q8N302 714 aaeCLIP11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 C2CD4AQ8NCU7 369 aaPredicted RBP11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 DOK4Q8TEW6 326 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 WNT2BQ93097 391 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 PPWD1Q96BP3 646 aaKnown RBP11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 ART5Q96L15 291 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 UCN2Q96RP3 112 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 FAM167BQ9BTA0 163 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 ANGPTL4Q9BY76 406 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 LYRM4Q9HD34 91 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 PRDM7Q9NQW5 492 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 IARS2Q9NSE4 1012 aaKnown RBP11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 TEX10Q9NXF1 929 aaPredicted RBP11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 FETUBQ9UGM5 382 aa11.69□□□□□ -0.54
CHRNA1-203ENST00000409219 A0A1W2PNV4 684 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 MAGEB16A2A368 324 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 H0Y3Z8 333 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 SNX4O95219 450 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 ACTL6AO96019 429 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 TP53P04637 393 aaPredicted RBP11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 PTPN6P29350 595 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 CD79BP40259 229 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 KCNJ1P48048 391 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 PCYT1AP49585 367 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 HERVK_113P63132 956 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 ERVK-8P63133 956 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 SARNPP82979 210 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 CBX1P83916 185 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 PDAP1Q13442 181 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 CLEC12BQ2HXU8 276 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 CHRFAM7AQ494W8 412 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 C22orf34Q6ZV56 151 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 YRDCQ86U90 279 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 PACS2Q86VP3 889 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 SPPL2AQ8TCT8 520 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 ZC3HAV1LQ96H79 300 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 FAM111AQ96PZ2 611 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 F2RL3Q96RI0 385 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 ERVK-6Q9BXR3 956 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 CXorf56Q9H5V9 222 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 YAE1D1Q9NRH1 226 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 RYDENQ9NUL5 291 aaKnown RBP11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 ERVK-19Q9WJR5 959 aa11.68□□□□□ -0.54
CHRNA1-203ENST00000409219 ANKDD1BA6NHY2 528 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 SDR42E2A6NKP2 422 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 TP53I11O14683 189 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 GNB5O14775 395 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 DYRK3O43781 588 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 SMNDC1O75940 238 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 GNAZP19086 355 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 HPDP32754 393 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 UGT2B10P36537 528 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 CASP3P42574 277 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 GDF5P43026 501 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 KCNC1P48547 511 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 VPS41P49754 854 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 SLC37A1P57057 533 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 PLIN5Q00G26 463 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 SRYQ05066 204 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 GAB1Q13480 694 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 TRIP13Q15645 432 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 C18orf21Q32NC0 220 aaPredicted RBP11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 VWA1Q6PCB0 445 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 RNF111Q6ZNA4 994 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 UBE3DQ7Z6J8 389 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 CTHRC1Q96CG8 243 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 TMEM41AQ96HV5 264 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 MS4A14Q96JA4 679 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 SERPINB12Q96P63 405 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 KCNC2Q96PR1 638 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 LRRC1Q9BTT6 524 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 REG4Q9BYZ8 158 aa11.67□□□□□ -0.54
CHRNA1-203ENST00000409219 NT5DC2Q9H857 520 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms