RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 HSPB2A8KAH6 182 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 UBXN8O00124 270 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 SYT5O00445 386 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 PLPP1O14494 284 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 KERAO60938 352 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 PRKRAO75569 313 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 CTAG2O75638 210 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 GPR75O95800 540 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 LTA4HP09960 611 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 SLC35E2BP0CK96 405 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 PTX3P26022 381 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 CRABP2P29373 138 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 PEX19P40855 299 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 BUD31P41223 144 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 KIR2DL3P43628 341 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 HNRNPH2P55795 449 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 SLC37A1P57057 533 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 GPX6P59796 221 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 HERVK_113P63132 956 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 ERVK-8P63133 956 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 TNFRSF17Q02223 184 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 SNTB1Q13884 538 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 ZNF267Q14586 743 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 HSPB2Q16082 182 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 SPRED3Q2MJR0 410 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 LIPJQ5W064 366 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 RNF111Q6ZNA4 994 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 CMC1Q7Z7K0 106 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 TBC1D1Q86TI0 1168 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 BIVMQ86UB2 503 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 ZZZ3Q8IYH5 903 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 ULK2Q8IYT8 1036 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 LIX1Q8N485 282 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 TEX9Q8N6V9 391 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 WFDC11Q8NEX6 87 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 OR10G3Q8NGC4 313 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 NEIL3Q8TAT5 605 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 RIT1Q92963 219 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 NINJ1Q92982 152 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 JSRP1Q96MG2 331 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 CDK15Q96Q40 435 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 GAL3ST4Q96RP7 486 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 MTERF1Q99551 399 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 PELOQ9BRX2 385 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 ERVK-6Q9BXR3 956 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 POLDIP3Q9BY77 421 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 WWTR1Q9GZV5 400 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 SLC6A15Q9H2J7 730 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 DPH5Q9H2P9 285 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 DMRT3Q9NQL9 472 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 CNOT11Q9UKZ1 510 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 ERVK-19Q9WJR5 959 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 PLEKHA6Q9Y2H5 1048 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 TSC22D4Q9Y3Q8 395 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 ASB4Q9Y574 426 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 ANGPTL3Q9Y5C1 460 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 PCDHGA11Q9Y5H2 935 aa8.42□□□□□ -1.06
NIF3L1-203ENST00000409129 C2orf92A0A1B0GVN3 265 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 A0A1W2PR48 441 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 ANKRD33BA6NCL7 494 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 SYCE1LA8MT33 242 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 CAPN14A8MX76 684 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 AHRRA9YTQ3 701 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 TP53I11O14683 189 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 OR10H2O60403 315 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 TRIM3O75382 744 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 EEDO75530 441 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 LRATO95237 230 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 EPPINO95925 133 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 CLPSP04118 112 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 FAM58BPP0C7Q3 252 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 SLC35E2P0CK97 266 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 MTHFD2P13995 350 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 FOSL1P15407 271 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 PCSK6P29122 969 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 UQCRC1P31930 480 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 CEACAM8P31997 349 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 GALNSP34059 522 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 BSGP35613 385 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 TRPC1P48995 793 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 RPS13P62277 151 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 PHEXP78562 749 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 SLMAPQ14BN4 828 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 EBPQ15125 230 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 NTRK2Q16620 822 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 KBTBD12Q3ZCT8 623 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 TBCELQ5QJ74 424 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 MRM1Q6IN84 353 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 CYP20A1Q6UW02 462 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 CLEC9AQ6UXN8 241 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 SEM1Q6ZVN7 128 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 MAATS1Q7Z4T9 603 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 MYLK4Q86YV6 388 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 TAGAPQ8N103 731 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 DEPDC4Q8N2C3 294 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 PPM1NQ8N819 430 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 RHEBL1Q8TAI7 183 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 NUDT8Q8WV74 236 aa8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 ANP32BQ92688 251 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-203ENST00000409129 DIO2Q92813 273 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms