RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 POLR1CO15160 346 aaPredicted RBP5.84□□□□□ -1.48
SCN1A-203ENST00000409050 ADAM23O75077 832 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 SOD2P04179 222 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 TRAPPC2P0DI81 140 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 TRAPPC2BP0DI82 140 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 CD34P28906 385 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 PKLRP30613 574 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 GNRHRP30968 328 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 VEGFCP49767 419 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 PLGLB1Q02325 96 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 DBPQ10586 325 aaPredicted RBP5.84□□□□□ -1.48
SCN1A-203ENST00000409050 FLYWCH1Q4VC44 716 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 HMBOX1Q6NT76 420 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 LINGO4Q6UY18 593 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 VASH1Q7L8A9 365 aaPredicted RBP5.84□□□□□ -1.48
SCN1A-203ENST00000409050 CEACAM19Q7Z692 300 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 LDB1Q86U70 411 aaPredicted RBP5.84□□□□□ -1.48
SCN1A-203ENST00000409050 SNX29P2Q8IUI4 249 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 LRRC56Q8IYG6 542 aaPredicted RBP5.84□□□□□ -1.48
SCN1A-203ENST00000409050 GTPBP8Q8N3Z3 284 aaPredicted RBP5.84□□□□□ -1.48
SCN1A-203ENST00000409050 OR8K5Q8NH50 307 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 PHOSPHO1Q8TCT1 267 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 PROKR1Q8TCW9 393 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 GATAD2BQ8WXI9 593 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 TMEM246Q9BRR3 403 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 TRMT61BQ9BVS5 477 aaKnown RBP5.84□□□□□ -1.48
SCN1A-203ENST00000409050 GORASP2Q9H8Y8 452 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 TLR9Q9NR96 1032 aa5.84□□□□□ -1.48
SCN1A-203ENST00000409050 LOC285095A0A1B0GVY8 99 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 GLTPD2A6NH11 291 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 CLDN24A6NM45 220 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 RNASET2O00584 256 aaKnown RBP5.83□□□□□ -1.48
SCN1A-203ENST00000409050 SNAPINO95295 136 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 S1PR4O95977 384 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 EGFP01133 1207 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 IL1AP01583 271 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 TPT1P13693 172 aaKnown RBP5.83□□□□□ -1.48
SCN1A-203ENST00000409050 UGT2B7P16662 529 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 CSNK1DP48730 415 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 CLCNKAP51800 687 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 CCL23P55773 120 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 CDK3Q00526 305 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 NFATC3Q12968 1075 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 GPR176Q14439 515 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 AKR1C8PQ5T2L2 129 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 SLC16A9Q7RTY1 509 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 TMED4Q7Z7H5 227 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 ELMOD2Q8IZ81 293 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 FAM156AQ8NDB6 213 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 ZFAND1Q8TCF1 268 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 GLYATL1Q969I3 302 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 UPRTQ96BW1 309 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 TMEM74Q96NL1 305 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 MUS81Q96NY9 551 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 FCRL3Q96P31 734 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-203ENST00000409050 TXN2Q99757 166 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 TREX2Q9BQ50 279 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-203ENST00000409050 ZNF436Q9C0F3 470 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-203ENST00000409050 TSPAN10Q9H1Z9 355 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-203ENST00000409050 RLIMQ9NVW2 624 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 OSER1Q9NX31 292 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 MAP10Q9P2G4 905 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 ZFR2Q9UPR6 939 aaKnown RBP5.83□□□□□ -1.48
SCN1A-203ENST00000409050 A0A0D9SG52 128 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 MAN2B1O00754 1011 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 TGOLN2O43493 480 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 SSX4O60224 188 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 KIAA0513O60268 411 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 GALTP07902 379 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 CDKN2CP42773 168 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 WNT4P56705 351 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 ARHGAP1Q07960 439 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 NPY5RQ15761 445 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 CCSAPQ6IQ19 270 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-203ENST00000409050 ENPP7Q6UWV6 458 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 RFPL4BQ6ZWI9 263 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 NLRP8Q86W28 1048 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 LAS2Q8IYD9 372 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 CMTM1Q8IZ96 169 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 DNAAF1Q8NEP3 725 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 SMAP2Q8WU79 429 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-203ENST00000409050 ASB17Q8WXJ9 295 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 PMM1Q92871 262 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 WDR92Q96MX6 357 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 SECISBP2Q96T21 854 aaKnown RBP5.83□□□□□ -1.48
SCN1A-203ENST00000409050 ACTRT3Q9BYD9 372 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 ARL6Q9H0F7 186 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 PNO1Q9NRX1 252 aaKnown RBP5.83□□□□□ -1.48
SCN1A-203ENST00000409050 RBMX2Q9Y388 322 aaKnown RBP5.83□□□□□ -1.48
SCN1A-203ENST00000409050 CXorf49A8MYA2 514 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-203ENST00000409050 NPIPA2E9PIF3 369 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 NPIPA3F8WFD2 350 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 NRP1O14786 923 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 RNF13O43567 381 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 USP2O75604 605 aaPredicted RBP5.83□□□□□ -1.48
SCN1A-203ENST00000409050 UPK1BO75841 260 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 KCNK5O95279 499 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 CSTAP01040 98 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 ENTPD1P49961 510 aa5.83□□□□□ -1.48
SCN1A-203ENST00000409050 DLX5P56178 289 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms