RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CELA3AP09093 270 aa17.78■□□□□ 0.44
SMARCB1-204ENST00000407422 CLCQ05315 142 aa17.78■□□□□ 0.44
SMARCB1-204ENST00000407422 UNC50Q53HI1 259 aa17.78■□□□□ 0.44
SMARCB1-204ENST00000407422 PRAMEF20Q5VT98 475 aa17.78■□□□□ 0.44
SMARCB1-204ENST00000407422 SLC22A10Q63ZE4 541 aa17.78■□□□□ 0.44
SMARCB1-204ENST00000407422 TMEM64Q6YI46 380 aa17.78■□□□□ 0.44
SMARCB1-204ENST00000407422 PAGE2Q7Z2X7 111 aa17.78■□□□□ 0.44
SMARCB1-204ENST00000407422 GSPT2Q8IYD1 628 aaKnown RBP17.78■□□□□ 0.44
SMARCB1-204ENST00000407422 RPRMLQ8N4K4 120 aa17.78■□□□□ 0.44
SMARCB1-204ENST00000407422 SLC15A4Q8N697 577 aa17.78■□□□□ 0.44
SMARCB1-204ENST00000407422 OR10G3Q8NGC4 313 aa17.78■□□□□ 0.44
SMARCB1-204ENST00000407422 OR4K14Q8NGD5 310 aa17.78■□□□□ 0.44
SMARCB1-204ENST00000407422 TMEM237Q96Q45 408 aa17.78■□□□□ 0.44
SMARCB1-204ENST00000407422 NPIPA2E9PIF3 369 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 NPIPA3F8WFD2 350 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 SUPT7LO94864 414 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 FBXO45P0C2W1 286 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 XKP51811 444 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 MAPK12P53778 367 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 TBL3Q12788 808 aaKnown RBP17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 ZNF678Q5SXM1 525 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 PAOXQ6QHF9 649 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 FAM109AQ8N4B1 249 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 CDYL2Q8N8U2 506 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 FAM13CQ8NE31 585 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 MYRIPQ8NFW9 859 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 PAQR8Q8TEZ7 354 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 SDCCAG3Q96C92 435 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 PROK2Q9HC23 129 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 TNFRSF10DQ9UBN6 386 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 TRPS1Q9UHF7 1281 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 SNX6Q9UNH7 406 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 CHCHD2Q9Y6H1 151 aaPredicted RBP17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 EXPH5Q8NEV8 1989 aa17.77■□□□□ 0.44
SMARCB1-204ENST00000407422 ATP6AP2A0A1C7CYW4 349 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 OR6C76A6NM76 312 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 ATP6AP2O75787 350 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 LRATO95237 230 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 CPMP14384 443 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 TAC1P20366 129 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 HYAL4Q2M3T9 481 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 GALNT12Q8IXK2 581 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 EID3Q8N140 333 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 ZNF441Q8N8Z8 693 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 OR5M3Q8NGP4 307 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 BRF2Q9HAW0 419 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 PNPLA3Q9NST1 481 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 TBK1Q9UHD2 729 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 CES1P1Q9UKY3 287 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 POLQO75417 2590 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 C2orf92A0A1B0GVN3 265 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 IGHG3P01860 377 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 RFPL3SP0C7P2 107 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 PYGBP11216 843 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 COX6B1P14854 86 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 KIR3DL1P43629 444 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 FUT7Q11130 342 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 GXYLT1Q4G148 440 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 TRILQ7L0X0 811 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 C1orf52Q8N6N3 182 aaKnown RBP17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 ZNF615Q8N8J6 731 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 OR5M9Q8NGP3 310 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 MZB1Q8WU39 189 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 TM4SF18Q96CE8 201 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 SMC6Q96SB8 1091 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 TP63Q9H3D4 680 aaPredicted RBP17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 PCDHA9Q9Y5H5 950 aa17.76■□□□□ 0.43
SMARCB1-204ENST00000407422 OTOGQ6ZRI0 2925 aa17.75■□□□□ 0.43
SMARCB1-204ENST00000407422 INTS1Q8N201 2190 aaKnown RBP17.75■□□□□ 0.43
SMARCB1-204ENST00000407422 FOXO6A8MYZ6 492 aa17.75■□□□□ 0.43
SMARCB1-204ENST00000407422 MANBAO00462 879 aa17.75■□□□□ 0.43
SMARCB1-204ENST00000407422 CHN1P15882 459 aa17.75■□□□□ 0.43
SMARCB1-204ENST00000407422 NT5EP21589 574 aa17.75■□□□□ 0.43
SMARCB1-204ENST00000407422 SERPINB3P29508 390 aa17.75■□□□□ 0.43
SMARCB1-204ENST00000407422 KCNJ2P63252 427 aa17.75■□□□□ 0.43
SMARCB1-204ENST00000407422 FAM180BQ6P0A1 224 aa17.75■□□□□ 0.43
SMARCB1-204ENST00000407422 SLC48A1Q6P1K1 146 aa17.75■□□□□ 0.43
SMARCB1-204ENST00000407422 FBXW8Q8N3Y1 598 aa17.75■□□□□ 0.43
SMARCB1-204ENST00000407422 CA5BP1Q8WTZ4 195 aa17.75■□□□□ 0.43
SMARCB1-204ENST00000407422 OR10A5Q9H207 317 aa17.75■□□□□ 0.43
SMARCB1-204ENST00000407422 RUBCNLQ9H714 662 aa17.75■□□□□ 0.43
SMARCB1-204ENST00000407422 PSMC3IPQ9P2W1 217 aaPredicted RBP17.75■□□□□ 0.43
SMARCB1-204ENST00000407422 PORP16435 677 aaPredicted RBP17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 IMPDH1P20839 514 aa17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 S1PR1P21453 382 aa17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 ATP5F1P24539 256 aaPredicted RBP17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 TNFRSF8P28908 595 aa17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 FEN1P39748 380 aaKnown RBP17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 HCFC1P51610 2035 aa17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 PRKAA2P54646 552 aa17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 RASA2Q15283 850 aa17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 NTRK2Q16620 822 aa17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 GPRIN3Q6ZVF9 776 aa17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 LCA5Q86VQ0 697 aa17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 DND1Q8IYX4 353 aaKnown RBP17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 TAGAPQ8N103 731 aa17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 ADIPOR1Q96A54 375 aa17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 ZNF382Q96SR6 550 aa17.74■□□□□ 0.43
SMARCB1-204ENST00000407422 COQ3Q9NZJ6 369 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms