RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ERAL1O75616 437 aaKnown RBP9.86□□□□□ -0.83
RPAIN-204ENST00000405578 HPP00738 406 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 PRR35P0CG20 571 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 SLC35E2P0CK97 266 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 IDO1P14902 403 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 ALOX15P16050 662 aaPredicted RBP9.86□□□□□ -0.83
RPAIN-204ENST00000405578 PORP16435 677 aaPredicted RBP9.86□□□□□ -0.83
RPAIN-204ENST00000405578 CSNK2A2P19784 350 aaPredicted RBP9.86□□□□□ -0.83
RPAIN-204ENST00000405578 NTSP30990 170 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 MPIP34949 423 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 XKP51811 444 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 HNRNPFP52597 415 aaKnown RBP9.86□□□□□ -0.83
RPAIN-204ENST00000405578 FOXL2P58012 376 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 STX1BP61266 288 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 IRX1P78414 480 aaPredicted RBP9.86□□□□□ -0.83
RPAIN-204ENST00000405578 EEF1A2Q05639 463 aaKnown RBP9.86□□□□□ -0.83
RPAIN-204ENST00000405578 ATP1A4Q13733 1029 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 TERF2Q15554 542 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 EXT1Q16394 746 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 GSTA3Q16772 222 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 SLC9B1Q4ZJI4 515 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 SFT2D3Q587I9 215 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 FAM71E1Q6IPT2 247 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 KIRREL2Q6UWL6 708 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 ST13P4Q8IZP2 240 aaPredicted RBP9.86□□□□□ -0.83
RPAIN-204ENST00000405578 NATD1Q8N6N6 113 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 TMEM52Q8NDY8 209 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 OR11G2Q8NGC1 345 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 DNAJB14Q8TBM8 379 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 ADAMTS17Q8TE56 1095 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 STON2Q8WXE9 905 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 PPCDCQ96CD2 204 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 ZNF764Q96H86 408 aaPredicted RBP9.86□□□□□ -0.83
RPAIN-204ENST00000405578 MAELQ96JY0 434 aaKnown RBP9.86□□□□□ -0.83
RPAIN-204ENST00000405578 ART5Q96L15 291 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 BBS4Q96RK4 519 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 ZBTB18Q99592 522 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 CCDC28BQ9BUN5 200 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 MFRPQ9BY79 579 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 ZNF700Q9H0M5 742 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 REEP4Q9H6H4 257 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 ATP13A2Q9NQ11 1180 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 NECTIN3Q9NQS3 549 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 MRGBPQ9NV56 204 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 ATAD3AQ9NVI7 634 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 SH3BP4Q9P0V3 963 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 GIMAP2Q9UG22 337 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 BAIAP2L1Q9UHR4 511 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 DCTN4Q9UJW0 460 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 FBXL4Q9UKA2 621 aa9.86□□□□□ -0.83
RPAIN-204ENST00000405578 ZGRF1Q86YA3 2104 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 IGHV1-45A0A0A0MS14 117 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 A0A1W2PQ72 361 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 ARGFXA6NJG6 315 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 SOCS6O14544 535 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 ZNF195O14628 629 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 AKAP10O43572 662 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 PRKRAO75569 313 aaKnown RBP9.85□□□□□ -0.83
RPAIN-204ENST00000405578 LRATO95237 230 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 G6PDP11413 515 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 CPMP14384 443 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 TACR1P25103 407 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 LSP1P33241 339 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 STT3AP46977 705 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 IDH3AP50213 366 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 CLNS1AP54105 237 aaKnown RBP9.85□□□□□ -0.83
RPAIN-204ENST00000405578 GNGT1P63211 74 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 ID2Q02363 134 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 AIMP2Q13155 320 aaKnown RBP9.85□□□□□ -0.83
RPAIN-204ENST00000405578 PTGR1Q14914 329 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 DCAF10Q5QP82 559 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 JMJD6Q6NYC1 403 aaPredicted RBP9.85□□□□□ -0.83
RPAIN-204ENST00000405578 PAPD4Q6PIY7 484 aaKnown RBP9.85□□□□□ -0.83
RPAIN-204ENST00000405578 LANCL3Q6ZV70 420 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 CPLX4Q7Z7G2 160 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 OR4N5Q8IXE1 308 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 KBTBD2Q8IY47 623 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 LRRC25Q8N386 305 aaPredicted RBP9.85□□□□□ -0.83
RPAIN-204ENST00000405578 OR14A16Q8NHC5 309 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 CLHC1Q8NHS4 586 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.85□□□□□ -0.83
RPAIN-204ENST00000405578 RIT1Q92963 219 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 GFM2Q969S9 779 aaKnown RBP9.85□□□□□ -0.83
RPAIN-204ENST00000405578 EXOSC8Q96B26 276 aaKnown RBP9.85□□□□□ -0.83
RPAIN-204ENST00000405578 ANKRD9Q96BM1 317 aaPredicted RBP9.85□□□□□ -0.83
RPAIN-204ENST00000405578 C8orf44Q96CB5 159 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 DPY30Q9C005 99 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 SLC35C2Q9NQQ7 365 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.85□□□□□ -0.83
RPAIN-204ENST00000405578 TAS2R7Q9NYW3 318 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 COPS7AQ9UBW8 275 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 CES1P1Q9UKY3 287 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 PCDHGA9Q9Y5G4 932 aaKnown RBP9.85□□□□□ -0.83
RPAIN-204ENST00000405578 CSMD2Q7Z408 3487 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 POLEQ07864 2286 aa9.85□□□□□ -0.83
RPAIN-204ENST00000405578 GMNCA6NCL1 334 aa9.84□□□□□ -0.83
RPAIN-204ENST00000405578 SAGE2PA6NJ88 616 aa9.84□□□□□ -0.83
RPAIN-204ENST00000405578 C17orf105B2RV13 164 aa9.84□□□□□ -0.83
RPAIN-204ENST00000405578 SEC24DO94855 1032 aaPredicted RBP9.84□□□□□ -0.83
RPAIN-204ENST00000405578 COX6A1P12074 109 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms