RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 FTHL17Q9BXU8 183 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 RWDD1Q9H446 243 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 NT5DC2Q9H857 520 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 IL1RL2Q9HB29 575 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 HOMER3Q9NSC5 361 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 HPF1Q9NWY4 346 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 MUTYHQ9UIF7 546 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 FGD5Q6ZNL6 1462 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 RAD54L2Q9Y4B4 1467 aa3.2□□□□□ -1.9
HMGB1P17-201ENST00000403495 ABCC4O15439 1325 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 IQCMA0A1B0GVH7 501 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 A8MXK9 166 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 K7EPI3 171 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 PDHXO00330 501 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 LANCL1O43813 399 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 SMPD2O60906 423 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 POP4O95707 220 aaKnown RBP3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 FCER2P06734 321 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 NCF1P14598 390 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 DPEP1P16444 411 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 TSPAN8P19075 237 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 MAT2AP31153 395 aaKnown RBP3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 ETV5P41161 510 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 ALDH3B1P43353 468 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 GPC3P51654 580 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 HYAL1Q12794 435 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 LY6DQ14210 128 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 HKDC1Q2TB90 917 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 MS4A18Q3C1V0 323 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 MUC21Q5SSG8 566 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 C12orf60Q5U649 245 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 DOK6Q6PKX4 331 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 ADAMTSL5Q6ZMM2 481 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 FAM43BQ6ZT52 329 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 KRTAP7-1Q8IUC3 87 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 RNF148Q8N7C7 305 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 GVQW1Q8N7I0 195 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 WDSUB1Q8N9V3 476 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 MLKLQ8NB16 471 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZBTB44Q8NCP5 570 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZNF397Q8NF99 534 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 OR4F17Q8NGA8 305 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 RDH11Q8TC12 318 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 NR4A3Q92570 626 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 GTF3AQ92664 365 aaKnown RBP3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 TAF4BQ92750 862 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 MOCOSQ96EN8 888 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 LINC00479Q96M42 142 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZNF599Q96NL3 588 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 AGAP3Q96P47 875 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 OR4F4Q96R69 305 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 VGLL1Q99990 258 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 CCSER1Q9C0I3 900 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 NACA2Q9H009 215 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 DCTPP1Q9H773 170 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 NRN1Q9NPD7 142 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZNF446Q9NWS9 450 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 TAS2R3Q9NYW6 316 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 ERRFI1Q9UJM3 462 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 UBE4BO95155 1302 aa3.19□□□□□ -1.9
HMGB1P17-201ENST00000403495 ASB14A6NK59 587 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 RPL37AP8A6NKH3 93 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 H7C423 109 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 SSX5O60225 188 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 RANBP6O60518 1105 aaKnown RBP3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 TSPAN2O60636 221 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 SCGB2A1O75556 95 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 TRIM16O95361 564 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 DIRAS3O95661 229 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 CCDC159P0C7I6 412 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZNF883P0CG24 379 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 CALRP27797 417 aaKnown RBP3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 PPP2R1AP30153 589 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 RFC2P35250 354 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 GSK3BP49841 420 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 NDST1P52848 882 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 MTTPP55157 894 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 HTD2P86397 168 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 PMP22Q01453 160 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 NME3Q13232 169 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 EMC2Q15006 297 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZNF699Q32M78 642 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 CEP85LQ5SZL2 805 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 IL23RQ5VWK5 629 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 FAM159AQ6UWV7 190 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 NUFIP2Q7Z417 695 aaKnown RBP3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 RPAINQ86UA6 219 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 PYROXD2Q8N2H3 581 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 ZNF781Q8N8C0 355 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 SUMF1Q8NBK3 374 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 PRSS33Q8NF86 280 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 OR52B4Q8NGK2 314 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 OR4Q3Q8NH05 313 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 FBXO25Q8TCJ0 367 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 DQX1Q8TE96 717 aaKnown RBP3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 CAPNS2Q96L46 248 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 ANKRD27Q96NW4 1050 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 CABLES2Q9BTV7 478 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 APOOQ9BUR5 198 aa3.18□□□□□ -1.9
HMGB1P17-201ENST00000403495 MCRIP2Q9BUT9 160 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms