RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 CD244Q9BZW8 370 aa13.31□□□□□ -0.28
VAMP1-203ENST00000400911 RHOJQ9H4E5 214 aa13.31□□□□□ -0.28
VAMP1-203ENST00000400911 CALHM2Q9HA72 323 aa13.31□□□□□ -0.28
VAMP1-203ENST00000400911 C15orf41Q9Y2V0 281 aa13.31□□□□□ -0.28
VAMP1-203ENST00000400911 MTO1Q9Y2Z2 717 aaKnown RBP13.31□□□□□ -0.28
VAMP1-203ENST00000400911 IKBKGQ9Y6K9 419 aa13.31□□□□□ -0.28
VAMP1-203ENST00000400911 C2orf92A0A1B0GVN3 265 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 GLOD5A6NK44 160 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 OR6C76A6NM76 312 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 FAM171A2A8MVW0 826 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 CAPN14A8MX76 684 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 PHGDHO43175 533 aaKnown RBP13.3□□□□□ -0.28
VAMP1-203ENST00000400911 ARHGEF9O43307 516 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 GOSR1O95249 250 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 GPR75O95800 540 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 TMIGD3P0DMS9 266 aaPredicted RBP13.3□□□□□ -0.28
VAMP1-203ENST00000400911 CD1DP15813 335 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 PCSK6P29122 969 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 HNRNPH2P55795 449 aaKnown RBP13.3□□□□□ -0.28
VAMP1-203ENST00000400911 POU4F1Q01851 419 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 FOXF2Q12947 444 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 RPS6KA2Q15349 733 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 SPRED3Q2MJR0 410 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 WIPI1Q5MNZ9 446 aaPredicted RBP13.3□□□□□ -0.28
VAMP1-203ENST00000400911 DEPDC1Q5TB30 811 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 LUZP2Q86TE4 346 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 ZNF441Q8N8Z8 693 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 PDPRQ8NCN5 879 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 FBXO36Q8NEA4 188 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 ABTB1Q969K4 478 aaPredicted RBP13.3□□□□□ -0.28
VAMP1-203ENST00000400911 UBE2E3Q969T4 207 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 RGMAQ96B86 450 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 ANGPTL4Q9BY76 406 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 TEX10Q9NXF1 929 aaPredicted RBP13.3□□□□□ -0.28
VAMP1-203ENST00000400911 PHF11Q9UIL8 331 aa13.3□□□□□ -0.28
VAMP1-203ENST00000400911 SH3D21A4FU49 640 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 ERN1O75460 977 aaKnown RBP13.29□□□□□ -0.28
VAMP1-203ENST00000400911 SSTR4P31391 388 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 SOX18P35713 384 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 BUD31P41223 144 aaPredicted RBP13.29□□□□□ -0.28
VAMP1-203ENST00000400911 CASP3P42574 277 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 SLCO1A2P46721 670 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 RAP1GDS1P52306 607 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 NAGLUP54802 743 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 ARL4CP56559 192 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 DDX39BQ13838 428 aaKnown RBP13.29□□□□□ -0.28
VAMP1-203ENST00000400911 E2F2Q14209 437 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 FASTKD3Q14CZ7 662 aaKnown RBP13.29□□□□□ -0.28
VAMP1-203ENST00000400911 Q5PR19 223 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 LRRC70Q7Z2Q7 622 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 YRDCQ86U90 279 aaKnown RBP13.29□□□□□ -0.28
VAMP1-203ENST00000400911 P3H2Q8IVL5 708 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 LRRC8AQ8IWT6 810 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 HUS1BQ8NHY5 278 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 ZPLD1Q8TCW7 415 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 SLC44A1Q8WWI5 657 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 EXT2Q93063 718 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 UCN3Q969E3 161 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 ISL2Q96A47 359 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 COX4I2Q96KJ9 171 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 PELOQ9BRX2 385 aaKnown RBP13.29□□□□□ -0.28
VAMP1-203ENST00000400911 SMYD2Q9NRG4 433 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 SNX15Q9NRS6 342 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 RYDENQ9NUL5 291 aaKnown RBP13.29□□□□□ -0.28
VAMP1-203ENST00000400911 GALNT8Q9NY28 637 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 RNF112Q9ULX5 631 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 NPFFR2Q9Y5X5 522 aa13.29□□□□□ -0.28
VAMP1-203ENST00000400911 A0A1W2PR48 441 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 H7C1Q1 480 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 PLPP1O14494 284 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 GNB5O14775 395 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 CASKO14936 926 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 S100BP04271 92 aaPredicted RBP13.28□□□□□ -0.28
VAMP1-203ENST00000400911 SERPINB1P30740 379 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 GMPRP36959 345 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 CPA2P48052 419 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 ATP6V0D1P61421 351 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 PCDH1Q08174 1060 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 PDIA2Q13087 525 aaKnown RBP13.28□□□□□ -0.28
VAMP1-203ENST00000400911 RCAN2Q14206 197 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 PLXDC2Q6UX71 529 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 PRR22Q8IZ63 422 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 ZCCHC7Q8N3Z6 543 aaKnown RBP13.28□□□□□ -0.28
VAMP1-203ENST00000400911 FAM83FQ8NEG4 500 aaPredicted RBP13.28□□□□□ -0.28
VAMP1-203ENST00000400911 SMPDL3BQ92485 455 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 ZNF592Q92610 1267 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 TP53INP1Q96A56 240 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 TSPAN17Q96FV3 270 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 SECISBP2Q96T21 854 aaKnown RBP13.28□□□□□ -0.28
VAMP1-203ENST00000400911 NSMCE4AQ9NXX6 385 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 ASB4Q9Y574 426 aa13.28□□□□□ -0.28
VAMP1-203ENST00000400911 NSD1Q96L73 2696 aaPredicted RBP13.28□□□□□ -0.28
VAMP1-203ENST00000400911 A0A1W2PS29 197 aa13.27□□□□□ -0.29
VAMP1-203ENST00000400911 SMAD7O15105 426 aaKnown RBP13.27□□□□□ -0.29
VAMP1-203ENST00000400911 TMPRSS11DO60235 418 aa13.27□□□□□ -0.29
VAMP1-203ENST00000400911 SMPD2O60906 423 aa13.27□□□□□ -0.29
VAMP1-203ENST00000400911 EEDO75530 441 aaKnown RBP13.27□□□□□ -0.29
VAMP1-203ENST00000400911 SLC35E2BP0CK96 405 aa13.27□□□□□ -0.29
VAMP1-203ENST00000400911 SLC35E2P0CK97 266 aa13.27□□□□□ -0.29
VAMP1-203ENST00000400911 CYP4B1P13584 511 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms