RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SIMC1Q8NDZ2 872 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ADCY4Q8NFM4 1077 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 OR5L2Q8NGL0 311 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 OR6Y1Q8NGX8 325 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ASB15Q8WXK1 588 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 NR4A3Q92570 626 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TMEM125Q96AQ2 219 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ZNF681Q96N22 645 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ZNF395Q9H8N7 513 aaPredicted RBP13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 EML4Q9HC35 981 aaKnown RBP13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 PSME2Q9UL46 239 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ERVK-11Q9UQG0 969 aa13.05□□□□□ -0.32
HLA-DQB1-202ENST00000399079 A8MVJ9 347 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CDK2AP1O14519 115 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ITM2AO43736 263 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 LYPLA1O75608 230 aaPredicted RBP13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ATP1B1P05026 303 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 MYZAPP0CAP1 466 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 DRD2P14416 443 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CSNK2A2P19784 350 aaPredicted RBP13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 S1PR1P21453 382 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SOX18P35713 384 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TDGF1P3P51864 188 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 GPR85P60893 370 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ZNF763Q0D2J5 394 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 MGAT2Q10469 447 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 FUT7Q11130 342 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 HEPACAMQ14CZ8 416 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 LTB4RQ15722 352 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 PRSS53Q2L4Q9 553 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 PRICKLE4Q2TBC4 344 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 NOXRED1Q6NXP6 359 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 FAM111BQ6SJ93 734 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SLC29A4Q7RTT9 530 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CROCCP2Q86T23 111 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 DDIASQ8IXT1 998 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CCDC116Q8IYX3 515 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CPSF7Q8N684 471 aaKnown RBP13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ST6GALNAC3Q8NDV1 305 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 NUBPLQ8TB37 319 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TWIST2Q8WVJ9 160 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 EXOSC8Q96B26 276 aaKnown RBP13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 EGLN2Q96KS0 407 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 FRMD6Q96NE9 622 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 BRINP2Q9C0B6 783 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TSPAN10Q9H1Z9 355 aaPredicted RBP13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 HPF1Q9NWY4 346 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ZDHHC2Q9UIJ5 367 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ACTL7BQ9Y614 415 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ZNF780BQ9Y6R6 833 aa13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 USP9XQ93008 2570 aaPredicted RBP13.04□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SLC28A1O00337 649 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 PIP5K1BO14986 540 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TM9SF1O15321 606 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 RGS14O43566 566 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CHEK2O96017 543 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CRYABP02511 175 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 DHRS4L1P0CG22 281 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 EDN3P14138 238 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TACR1P25103 407 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 RFC3P40938 356 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 MRPS35P82673 323 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 C2orf80Q0P641 193 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 EXOSC7Q15024 291 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 EBPQ15125 230 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CHI3L2Q15782 390 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 MPEG1Q2M385 716 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 RFTN2Q52LD8 501 aaPredicted RBP13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SULF2Q8IWU5 870 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 LRRC25Q8N386 305 aaPredicted RBP13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 VWA5B2Q8N398 1253 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ZNF615Q8N8J6 731 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 PSD4Q8NDX1 1056 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 DNAJB8Q8NHS0 232 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 PPP1R14CQ8TAE6 165 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 WWTR1Q9GZV5 400 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 OR10A5Q9H207 317 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 LRTM1Q9HBL6 345 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 PFDN4Q9NQP4 134 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 C1orf109Q9NX04 203 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 MAT2BQ9NZL9 334 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 GIMAP2Q9UG22 337 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 EXO1Q9UQ84 846 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 DTX4Q9Y2E6 619 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 LRRK2Q5S007 2527 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ASPDHA6ND91 283 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 LSM1O15116 133 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SEMA7AO75326 666 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 NADKO95544 446 aaPredicted RBP13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 DDCP20711 480 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 PRPH2P23942 346 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 SERPINB5P36952 375 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 KCNK10P57789 538 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 MAP4K2Q12851 820 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 ELOAQ14241 798 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 CASP8Q14790 479 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 GALNTL6Q49A17 601 aa13.03□□□□□ -0.32
HLA-DQB1-202ENST00000399079 TRMT12Q53H54 448 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms