RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 PINLYPA6NC86 204 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 FAM166BA8MTA8 275 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 KIR3DP1A8MWS1 328 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 DLX3O60479 287 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 PDE9AO76083 593 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 OR4F21O95013 312 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 PDYNP01213 254 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 KRT6AP02538 564 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 KRT6BP04259 564 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 GSTA1P08263 222 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 CCL3P10147 92 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 ATP5F1P24539 256 aaPredicted RBP12.38□□□□□ -0.43
VCX3A-202ENST00000398729 KRT6CP48668 564 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 SLC37A1P57057 533 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 RASA2Q15283 850 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 ZNF791Q3KP31 576 aaPredicted RBP12.38□□□□□ -0.43
VCX3A-202ENST00000398729 ZNF678Q5SXM1 525 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 C6orf163Q5TEZ5 329 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 SLC22A10Q63ZE4 541 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 C3P1Q6ZMU1 363 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 COMMD6Q7Z4G1 85 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 CD163Q86VB7 1156 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 SLC22A9Q8IVM8 553 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 GALNT12Q8IXK2 581 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 SPACA9Q96E40 222 aaPredicted RBP12.38□□□□□ -0.43
VCX3A-202ENST00000398729 WWTR1Q9GZV5 400 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 ZDHHC11Q9H8X9 412 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 IL1RL2Q9HB29 575 aa12.38□□□□□ -0.43
VCX3A-202ENST00000398729 ANKHD1Q8IWZ3 2542 aaKnown RBP12.38□□□□□ -0.43
VCX3A-202ENST00000398729 C2orf92A0A1B0GVN3 265 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 C1orf226A1L170 272 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 GOLGA8RI6L899 631 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 GLSO94925 669 aaPredicted RBP12.37□□□□□ -0.43
VCX3A-202ENST00000398729 NADKO95544 446 aaPredicted RBP12.37□□□□□ -0.43
VCX3A-202ENST00000398729 PYGBP11216 843 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 HSD3B1P14060 373 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 HSD3B2P26439 372 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 SERPINB3P29508 390 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 DNASE1L1P49184 302 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 XKP51811 444 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 EBPQ15125 230 aaKnown RBP12.37□□□□□ -0.43
VCX3A-202ENST00000398729 CDSNQ15517 529 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 KRTAP21-3Q3LHN1 58 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 UNC50Q53HI1 259 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 LYPD8Q6UX82 237 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 GSPT2Q8IYD1 628 aaKnown RBP12.37□□□□□ -0.43
VCX3A-202ENST00000398729 TAGAPQ8N103 731 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 FAM109AQ8N4B1 249 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 CDYL2Q8N8U2 506 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 EIF1ADQ8N9N8 165 aaKnown RBP12.37□□□□□ -0.43
VCX3A-202ENST00000398729 TMEM237Q96Q45 408 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 DMRTA2Q96SC8 542 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 ZNF382Q96SR6 550 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 CXorf21Q9HAI6 301 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 VPS29Q9UBQ0 182 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 TBK1Q9UHD2 729 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 DCDC2Q9UHG0 476 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 ZNF225Q9UK10 706 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 STK38LQ9Y2H1 464 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 PCDHA9Q9Y5H5 950 aa12.37□□□□□ -0.43
VCX3A-202ENST00000398729 CACNA1CQ13936 2221 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 A0A1W2PS29 197 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 GOLGA6L10A6NI86 522 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 CAPN14A8MX76 684 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 C19orf84I3L1E1 186 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 ADAM10O14672 748 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 CLDN14O95500 239 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 CLPSP04118 112 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 FBXO45P0C2W1 286 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 CPMP14384 443 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 COX6B1P14854 86 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 PORP16435 677 aaPredicted RBP12.36□□□□□ -0.43
VCX3A-202ENST00000398729 IMPDH1P20839 514 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 NT5EP21589 574 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 HMOX2P30519 316 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 SSTR4P31391 388 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 DEKP35659 375 aaKnown RBP12.36□□□□□ -0.43
VCX3A-202ENST00000398729 PRKAA2P54646 552 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 GALNT1Q10472 559 aaPredicted RBP12.36□□□□□ -0.43
VCX3A-202ENST00000398729 FUT7Q11130 342 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 HLA-DQA1Q5Y7H0 255 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 TMEM211Q6ICI0 200 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 SLC48A1Q6P1K1 146 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 GPRIN3Q6ZVF9 776 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 NCCRP1Q6ZVX7 275 aaPredicted RBP12.36□□□□□ -0.43
VCX3A-202ENST00000398729 TMEM251Q8N6I4 163 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 FAM13CQ8NE31 585 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 METTL6Q8TCB7 284 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 PAQR8Q8TEZ7 354 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 TP53INP1Q96A56 240 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 L3HYPDHQ96EM0 354 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 HBEGFQ99075 208 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 FAIM2Q9BWQ8 316 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 EPB41L4BQ9H329 900 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 TP63Q9H3D4 680 aaPredicted RBP12.36□□□□□ -0.43
VCX3A-202ENST00000398729 SH2D2AQ9NP31 389 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 TUBA8Q9NY65 449 aaPredicted RBP12.36□□□□□ -0.43
VCX3A-202ENST00000398729 COQ3Q9NZJ6 369 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 CNIH4Q9P003 139 aa12.36□□□□□ -0.43
VCX3A-202ENST00000398729 PSME2Q9UL46 239 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms