RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 C5AR2Q9P296 337 aa13.55□□□□□ -0.24
PCDHGA11-201ENST00000398587 C17orf113A0A1B0GUU1 675 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 DBIP07108 87 aaKnown RBP13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 CELP19835 753 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 MRPL58Q14197 206 aaKnown RBP13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 OR51A7Q8NH64 312 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 C15orf40Q8WUR7 153 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 HSPBAP1Q96EW2 488 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 EGLN2Q96KS0 407 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 SARDHQ9UL12 918 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 NPIPA5E9PKD4 350 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 DUX1O43812 170 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 STSP08842 583 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 RASGEF1BQ0VAM2 473 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 HMGN2P46Q86SG4 172 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 MYLIPQ8WY64 445 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 FAM3CQ92520 227 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 ZNF597Q96LX8 424 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 ACTRT3Q9BYD9 372 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 BCL2L14Q9BZR8 327 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 MTHFD2LQ9H903 347 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 GRHPRQ9UBQ7 328 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 NPIPA1Q9UND3 350 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 FAM25EA8MYX2 175 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 OR2B3O76000 313 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 KLHL18O94889 574 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 GGTA1PQ4G0N0 100 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 LGALS12Q96DT0 336 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 METTL7AQ9H8H3 244 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 UBAP1Q9NZ09 502 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 GABRR3A8MPY1 467 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 WASH3PC4AMC7 463 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 GJA4P35212 333 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 SLC9A3P48764 834 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 GPR143P51810 404 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 OR2B6P58173 313 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 PTPRRQ15256 657 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 SPHARQ15513 63 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 DENND6BQ8NEG7 585 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 FRS2Q8WU20 508 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 TMEM234Q8WY98 164 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 KLHL31Q9H511 634 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 UPB1Q9UBR1 384 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 SUSD2Q9UGT4 822 aa13.54□□□□□ -0.24
PCDHGA11-201ENST00000398587 CDK5RAP2Q96SN8 1893 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 UNC119BA6NIH7 251 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 FBP2O00757 339 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 VILLO15195 856 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 MITFO75030 526 aaPredicted RBP13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 NDUFV2P19404 249 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 PTNP21246 168 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 SHC2P98077 582 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 GRM7Q14831 915 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 KIR2DS3Q14952 304 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 ANKRD33Q7Z3H0 272 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 RETREG3Q86VR2 466 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 OR2L5Q8NG80 312 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 GATA6Q92908 595 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 ZNF300Q96RE9 604 aaPredicted RBP13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 TIMM29Q9BSF4 260 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 OR6C2Q9NZP2 312 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 CCL26Q9Y258 94 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 SH3D21A4FU49 640 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 HCRTR2O43614 444 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 PSKH1P11801 424 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 ADAM8P78325 824 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 FAM78AQ5JUQ0 283 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 SBSNQ6UWP8 590 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 MFSD2AQ8NA29 543 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 THRSPQ92748 146 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 FKBP10Q96AY3 582 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 LRR1Q96L50 414 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 BARD1Q99728 777 aaKnown RBP13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 TM9SF2Q99805 663 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 RIMS3Q9UJD0 308 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 A0A075B6Q4 140 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 PRAMEF33A0A0G2JMD5 474 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 PRAMEF10O60809 474 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 CKMT1AP12532 417 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 ARNTP27540 789 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 TCTE1Q5JU00 501 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 RSPO2Q6UXX9 243 aaPredicted RBP13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 QSOX2Q6ZRP7 698 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 SIX5Q8N196 739 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 THEM6Q8WUY1 208 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 ERMAPQ96PL5 475 aaPredicted RBP13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 SECISBP2Q96T21 854 aaKnown RBP13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 POLDIP3Q9BY77 421 aaKnown RBP13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 PTGES2Q9H7Z7 377 aa13.53□□□□□ -0.24
PCDHGA11-201ENST00000398587 ANTXRLA6NF34 631 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 ZDHHC11BP0C7U3 371 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 CASRP41180 1078 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 MLLT10P55197 1068 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 DCDC1P59894 354 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 FIGNL1Q6PIW4 674 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 RNF111Q6ZNA4 994 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 LKAAEAR1Q8TD35 194 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 UBTD2Q8WUN7 234 aa13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 CIDECQ96AQ7 238 aaPredicted RBP13.52□□□□□ -0.24
PCDHGA11-201ENST00000398587 BIRC8Q96P09 236 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms