RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SLC9A3P48764 834 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TPMTP51580 245 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 MYBPC1Q00872 1141 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TNFRSF17Q02223 184 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 C1DQ13901 141 aaKnown RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TJAP1Q5JTD0 557 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TCTN3Q6NUS6 607 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF613Q6PF04 617 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 GKN2Q86XP6 184 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 LSMEM1Q8N8F7 131 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 OR14C36Q8NHC7 312 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 ING5Q8WYH8 240 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 HMG20AQ9NP66 347 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 MTCH2Q9Y6C9 303 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TBC1D3DA0A087WVF3 549 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TBC1D3IA0A087WXS9 549 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TBC1D3EA0A087X179 549 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 A0A1W2PP55 124 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TBC1D3LB9A6J9 549 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TBC1D3HP0C7X1 549 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 PDHA2P29803 388 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 SEC23BQ15437 767 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 MOGQ16653 247 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TBC1D3CQ6IPX1 549 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 CDC73Q6P1J9 531 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 LAYNQ6UX15 382 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TBC1D3Q8IZP1 549 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TM4SF18Q96CE8 201 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 RBM18Q96H35 190 aaKnown RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 SLC35G5Q96KT7 338 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 SNX18Q96RF0 628 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 DUSP23Q9BVJ7 150 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 MMP27Q9H306 513 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 FZD3Q9NPG1 666 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 HAO2Q9NYQ3 351 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 G3BP2Q9UN86 482 aaKnown RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF780BQ9Y6R6 833 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 H0YC42 278 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 PAK4O96013 591 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 DLX5P56178 289 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TRAM1Q15629 374 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 MLF2Q15773 248 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 CYP27C1Q4G0S4 372 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 PEX5LQ8IYB4 626 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 ZDHHC12Q96GR4 267 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 CARS2Q9HA77 564 aaKnown RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 KCNK12Q9HB15 430 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 FKBP14Q9NWM8 211 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 IL20Q9NYY1 176 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 CDK4P11802 303 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 GSSP48637 474 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 PLIN5Q00G26 463 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 DUSP8Q13202 625 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TSC22D1Q15714 1073 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 RASSF6Q6ZTQ3 369 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 VN1R4Q7Z5H5 301 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF605Q86T29 641 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 RNF148Q8N7C7 305 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 OR7G1Q8NGA0 311 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 LIPHQ8WWY8 451 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 SORCS1Q8WY21 1168 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 RERGQ96A58 199 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 ELP4Q96EB1 424 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 CHFRQ96EP1 664 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 MED8Q96G25 268 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TRIM4Q9C037 500 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TAC3Q9UHF0 121 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 PCDHGA8Q9Y5G5 932 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 MN1Q10571 1320 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TICRRQ7Z2Z1 1910 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 OTOL1A6NHN0 477 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TMX2-CTNND1H3BSU7 103 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 GPR39O43194 453 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 CTNSO60931 367 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 OSMP13725 252 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 GSTT1P30711 240 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 FGF9P31371 208 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 GKP32189 559 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 TRHRP34981 398 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 UGT2B10P36537 528 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 RAB40BQ12829 278 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 DDX39BQ13838 428 aaKnown RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 NCF4Q15080 339 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 ZNF550Q7Z398 422 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 RANBP3LQ86VV4 465 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 GPALPP1Q8IXQ4 340 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 FIG4Q92562 907 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 FGF14Q92915 247 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 EGLN2Q96KS0 407 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 SRMSQ9H3Y6 488 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 GPATCH2Q9NW75 528 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 NXT1Q9UKK6 140 aaKnown RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 PRODHO43272 600 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 B3GALT2O43825 422 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 ITGA10O75578 1167 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 CHRM5P08912 532 aaPredicted RBP5.54□□□□□ -1.52
PTPRD-206ENST00000397617 CD6P30203 668 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 ETV6P41212 452 aa5.54□□□□□ -1.52
PTPRD-206ENST00000397617 RAE1P78406 368 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms