RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 PTPRBP23467 1997 aa22.07■■□□□ 1.12
TSPAN4-202ENST00000397396 A0A087WV62 115 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 RNF103-CHMP3A0A140T963 221 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 IDSB3KWA1 339 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 EMC8O43402 210 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 IGHEP01854 428 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 IFNA16P05015 189 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 GSNP06396 782 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 CDK9P50750 372 aaKnown RBP22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 EMP2P54851 167 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 TXNL4AP83876 142 aaKnown RBP22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 VAC14Q08AM6 782 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 RTP5Q14D33 572 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 ELAVL1Q15717 326 aaKnown RBP22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 RUNDC3AQ59EK9 446 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 NANOGP8Q6NSW7 305 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 PRSS58Q8IYP2 241 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 FBXO27Q8NI29 283 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 NXPE2Q96DL1 559 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 ART5Q96L15 291 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 SOX17Q9H6I2 414 aaPredicted RBP22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 CXorf36Q9H7Y0 433 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 NANOGQ9H9S0 305 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 SIRT3Q9NTG7 399 aaPredicted RBP22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 DDX18Q9NVP1 670 aaKnown RBP22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 SLC25A37Q9NYZ2 338 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 C3orf18Q9UK00 162 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 CLDN16Q9Y5I7 305 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 CLIC1O00299 241 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 BRINP1O60477 761 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 RAD1O60671 282 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 ALOX12BO75342 701 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 BCAS2O75934 225 aaPredicted RBP22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 RECKO95980 971 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 SLC6A2P23975 617 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 FOLR3P41439 243 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 CCT3P49368 545 aaKnown RBP22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 ANXA11P50995 505 aaKnown RBP22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 RPS15P62841 145 aaKnown RBP22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 DUSP2Q05923 314 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 MAP4K2Q12851 820 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 GAB1Q13480 694 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 ZNF628Q5EBL2 1059 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 LCN10Q6JVE6 187 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 TMEM107Q6UX40 140 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 MSRB3Q8IXL7 192 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 SHISA5Q8N114 240 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 OR2Y1Q8NGV0 311 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 ZFP90Q8TF47 636 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 RIT1Q92963 219 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 ELP4Q96EB1 424 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 CPPED1Q9BRF8 314 aaPredicted RBP22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 GPR87Q9BY21 358 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 TPT1P8Q9HAU6 139 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 ABCD2Q9UBJ2 740 aa22.06■■□□□ 1.12
TSPAN4-202ENST00000397396 TGFBR3LH3BV60 316 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 PLOD3O60568 738 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 COQ9O75208 318 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 TNNI3P19429 210 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 TCN2P20062 427 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 SLC7A2P52569 658 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 PRICKLE4Q2TBC4 344 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 SAMD4BQ5PRF9 694 aaKnown RBP22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 FAM199XQ6PEV8 388 aaPredicted RBP22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 TIPARPQ7Z3E1 657 aaKnown RBP22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 VWA5B2Q8N398 1253 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 DAZLQ92904 295 aaKnown RBP22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 TSLPQ969D9 159 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 NEURL3Q96EH8 262 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 RAB3IPQ96QF0 476 aaPredicted RBP22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 SLC39A3Q9BRY0 314 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 THUMPD3Q9BV44 507 aaKnown RBP22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 CXorf21Q9HAI6 301 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 ZCCHC3Q9NUD5 404 aaKnown RBP22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 ADA2Q9NZK5 511 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 MAT2BQ9NZL9 334 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 NTMQ9P121 344 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 TMEM181Q9P2C4 612 aa22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 PTRH2Q9Y3E5 179 aaKnown RBP22.05■■□□□ 1.12
TSPAN4-202ENST00000397396 TEX51A0A1B0GUA7 166 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 A0A1W2PS29 197 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 CFAP73A6NFT4 308 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 GSC2O15499 205 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 PGM1P36871 562 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 MC3RP41968 323 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 STAT5AP42229 794 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 FADDQ13158 208 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 LTB4RQ15722 352 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 GTDC1Q4AE62 458 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 SAXO2Q658L1 398 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 LAPTM4BQ86VI4 370 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 OR2L13Q8N349 312 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 ENDOVQ8N8Q3 282 aaKnown RBP22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 OR14A16Q8NHC5 309 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 CT55Q8WUE5 264 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 CTHRC1Q96CG8 243 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 FAM120BQ96EK7 910 aaKnown RBP22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 VPS50Q96JG6 964 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 MS4A4EQ96PG1 132 aa22.04■■□□□ 1.12
TSPAN4-202ENST00000397396 CDRT15Q96T59 188 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms