RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.31■□□□□ 0.04
AP1S3-202ENST00000396653 MAT2BQ9NZL9 334 aa15.31■□□□□ 0.04
AP1S3-202ENST00000396653 COPS7AQ9UBW8 275 aa15.31■□□□□ 0.04
AP1S3-202ENST00000396653 LAMP1P11279 417 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 DRD4P21917 467 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 ITGA3P26006 1051 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 NCBP2P52298 156 aaKnown RBP eCLIP15.3■□□□□ 0.04
AP1S3-202ENST00000396653 SEC24CP53992 1094 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 UFM1P61960 85 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 FUT7Q11130 342 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 SQLEQ14534 574 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 MYBPC3Q14896 1274 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 ZNF628Q5EBL2 1059 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 FAM180BQ6P0A1 224 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 DGAT2L6Q6ZPD8 337 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 VWA5B2Q8N398 1253 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 OR7G1Q8NGA0 311 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 OR8K3Q8NH51 312 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 ZNF721Q8TF20 911 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 NCLNQ969V3 563 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 SENP5Q96HI0 755 aaPredicted RBP15.3■□□□□ 0.04
AP1S3-202ENST00000396653 THOC3Q96J01 351 aaKnown RBP15.3■□□□□ 0.04
AP1S3-202ENST00000396653 AMDHD1Q96NU7 426 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 ZBTB18Q99592 522 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 DUSP26Q9BV47 211 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 OR8D2Q9GZM6 311 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 GLIPR2Q9H4G4 154 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 SLAMF7Q9NQ25 335 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 ZNF639Q9UID6 485 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 G3BP2Q9UN86 482 aaKnown RBP15.3■□□□□ 0.04
AP1S3-202ENST00000396653 ERVK-19Q9WJR5 959 aa15.3■□□□□ 0.04
AP1S3-202ENST00000396653 PCDHGA9Q9Y5G4 932 aaKnown RBP15.3■□□□□ 0.04
AP1S3-202ENST00000396653 COPG1Q9Y678 874 aaKnown RBP15.3■□□□□ 0.04
AP1S3-202ENST00000396653 OR6C76A6NM76 312 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 MASP2O00187 686 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 PLOD2O00469 737 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 SLC22A3O75751 556 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 BCAS2O75934 225 aaPredicted RBP15.29■□□□□ 0.04
AP1S3-202ENST00000396653 CELA2AP08217 269 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 CT62P0C5K7 136 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 ITGAMP11215 1152 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 KIR3DL1P43629 444 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 PGDP52209 483 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 MGAT2Q10469 447 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 ZNF267Q14586 743 aaPredicted RBP15.29■□□□□ 0.04
AP1S3-202ENST00000396653 H3F3CQ6NXT2 135 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 SPATA21Q7Z572 469 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 LGI4Q8N135 537 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 OR9A2Q8NGT5 310 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 TTC9Q92623 222 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 EXTL1Q92935 676 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 CIDECQ96AQ7 238 aaPredicted RBP15.29■□□□□ 0.04
AP1S3-202ENST00000396653 TEX37Q96LM6 180 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 CNPPD1Q9BV87 410 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 ADNPQ9H2P0 1102 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 RABEP2Q9H5N1 569 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 ZNF385DQ9H6B1 395 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 NEUROD4Q9HD90 331 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 RYDENQ9NUL5 291 aaKnown RBP15.29■□□□□ 0.04
AP1S3-202ENST00000396653 FAM120CQ9NX05 1096 aaKnown RBP15.29■□□□□ 0.04
AP1S3-202ENST00000396653 TUBD1Q9UJT1 453 aa15.29■□□□□ 0.04
AP1S3-202ENST00000396653 ZNF223Q9UK11 482 aaPredicted RBP15.29■□□□□ 0.04
AP1S3-202ENST00000396653 A0A087WV62 115 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 TRBV11-1A0A0K0K1C0 115 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 RNASET2O00584 256 aaKnown RBP15.28■□□□□ 0.04
AP1S3-202ENST00000396653 PLOD3O60568 738 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 SHOX2O60902 331 aaPredicted RBP15.28■□□□□ 0.04
AP1S3-202ENST00000396653 DNAJB5O75953 348 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 S1PR1P21453 382 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 GPX3P22352 226 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 IL12AP29459 219 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 SOX18P35713 384 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 CCL11P51671 97 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 MANFP55145 182 aaKnown RBP15.28■□□□□ 0.04
AP1S3-202ENST00000396653 POLE2P56282 527 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 WNT3P56703 355 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 LRRC74AQ0VAA2 488 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 LTB4RQ15722 352 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 FAM174BQ3ZCQ3 159 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 CRB2Q5IJ48 1285 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 SPANXN4Q5MJ08 99 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 ANXA8L1Q5VT79 327 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 RNF111Q6ZNA4 994 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 MSANTD1Q6ZTZ1 278 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 CPLX4Q7Z7G2 160 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 ARMC10Q8N2F6 343 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 OR5P2Q8WZ92 322 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 PSMF1Q92530 271 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 NUDT9Q9BW91 350 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 GPR83Q9NYM4 423 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 CFL2Q9Y281 166 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 PCDHGB7Q9Y5F8 929 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 LAMA5O15230 3695 aa15.28■□□□□ 0.04
AP1S3-202ENST00000396653 CACNA1GO43497 2377 aa15.27■□□□□ 0.04
AP1S3-202ENST00000396653 A0A1W2PRB8 838 aa15.27■□□□□ 0.04
AP1S3-202ENST00000396653 FAM234BA2RU67 622 aa15.27■□□□□ 0.04
AP1S3-202ENST00000396653 MKRN2OSH3BPM6 223 aa15.27■□□□□ 0.04
AP1S3-202ENST00000396653 CDK2AP1O14519 115 aa15.27■□□□□ 0.04
AP1S3-202ENST00000396653 SNX3O60493 162 aa15.27■□□□□ 0.04
AP1S3-202ENST00000396653 PRAMEF2O60811 474 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms