RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 RAB36O95755 333 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 GBAP04062 536 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 H1F0P07305 194 aaKnown RBP12.63□□□□□ -0.39
TRIM40-207ENST00000396581 CLEC2LP0C7M8 214 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 C1GALT1C1LP0DN25 315 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 GAAP10253 952 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 NPPBP16860 134 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 DGKGP49619 791 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 PRLHRP49683 370 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 DGKEP52429 567 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 POLR2LP62875 67 aaKnown RBP12.63□□□□□ -0.39
TRIM40-207ENST00000396581 TPBGQ13641 420 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 EFR3AQ14156 821 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 SHHQ15465 462 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 TEAD2Q15562 447 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 C3orf38Q5JPI3 329 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 ZNF730Q6ZMV8 503 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 HSD11B1LQ7Z5J1 315 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 PLCZ1Q86YW0 608 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 LRRC56Q8IYG6 542 aaPredicted RBP12.63□□□□□ -0.39
TRIM40-207ENST00000396581 TCEANCQ8N8B7 351 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 PLA2G15Q8NCC3 412 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 SLC38A5Q8WUX1 472 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 DIRAS2Q96HU8 199 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 SGPP1Q9BX95 441 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 SLC6A16Q9GZN6 736 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 SMG9Q9H0W8 520 aaKnown RBP12.63□□□□□ -0.39
TRIM40-207ENST00000396581 ZDHHC6Q9H6R6 413 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 PPP1R3EQ9H7J1 279 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 CXorf36Q9H7Y0 433 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 TDP1Q9NUW8 608 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 ZSCAN32Q9NX65 697 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 TAAR2Q9P1P5 351 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 HCFC2Q9Y5Z7 792 aa12.63□□□□□ -0.39
TRIM40-207ENST00000396581 PCM1Q15154 2024 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 NOTCH4Q99466 2003 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 TRANK1O15050 2925 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 TMEM129A0AVI4 362 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 PIPSLA2A3N6 862 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 WASH3PC4AMC7 463 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 TBX19O60806 448 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 TMCC2O75069 709 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 ALAS2P22557 587 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 PTBP1P26599 531 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRIM40-207ENST00000396581 FGF9P31371 208 aaPredicted RBP12.62□□□□□ -0.39
TRIM40-207ENST00000396581 GSTM5P46439 218 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 KCNJ5P48544 419 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 GZMKP49863 264 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 TBPL1P62380 186 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 COX10Q12887 443 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 GPM6BQ13491 265 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 RIN1Q13671 783 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 SLBPQ14493 270 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRIM40-207ENST00000396581 QPRTQ15274 297 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 DUSP6Q16828 381 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 SYTL3Q4VX76 610 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 ARHGAP15Q53QZ3 475 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 FAM209AQ5JX71 171 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 SYCE2Q6PIF2 218 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 CD200R1LQ6Q8B3 271 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 METAP1DQ6UB28 335 aaPredicted RBP12.62□□□□□ -0.39
TRIM40-207ENST00000396581 QSOX2Q6ZRP7 698 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 USP30Q70CQ3 517 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 LILRA3Q8N6C8 439 aaPredicted RBP12.62□□□□□ -0.39
TRIM40-207ENST00000396581 ZNF480Q8WV37 535 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 AP3S1Q92572 193 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 ZNF354BQ96LW1 612 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 KCTD7Q96MP8 289 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 KATNB1Q9BVA0 655 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 NLNQ9BYT8 704 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 POLR2J3Q9H1A7 115 aaKnown RBP12.62□□□□□ -0.39
TRIM40-207ENST00000396581 ANKRA2Q9H9E1 313 aa12.62□□□□□ -0.39
TRIM40-207ENST00000396581 RPRD1BQ9NQG5 326 aaKnown RBP12.62□□□□□ -0.39
TRIM40-207ENST00000396581 PRRC2BQ5JSZ5 2229 aaKnown RBP12.62□□□□□ -0.39
TRIM40-207ENST00000396581 PRKYO43930 277 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 OR10H3O60404 316 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 ATG13O75143 517 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 ZNF780AO75290 641 aaPredicted RBP12.61□□□□□ -0.39
TRIM40-207ENST00000396581 PDE9AO76083 593 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 C1orf105O95561 183 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 TGFB1P01137 390 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 VIPR1P32241 457 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 ETV5P41161 510 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 PREPP48147 710 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 ETV1P50549 477 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 CTSCP53634 463 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 WNT4P56705 351 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 SMIM11AP58511 58 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 HOXC5Q00444 222 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 MXD1Q05195 221 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 GPR19Q15760 415 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 SYT14P1Q58G82 188 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 LRRC73Q5JTD7 316 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 C22orf42Q6IC83 251 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 BCDIN3DQ7Z5W3 292 aaKnown RBP12.61□□□□□ -0.39
TRIM40-207ENST00000396581 HORMAD2Q8N7B1 307 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 RASGEF1AQ8N9B8 481 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 ZNF707Q96C28 371 aaPredicted RBP12.61□□□□□ -0.39
TRIM40-207ENST00000396581 MED30Q96HR3 178 aa12.61□□□□□ -0.39
TRIM40-207ENST00000396581 ZSCAN5AQ9BUG6 496 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms