RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 PRAMEF7Q5VXH5 474 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 DEF8Q6ZN54 512 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 SYT13Q7L8C5 426 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 ZNF605Q86T29 641 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 NUP43Q8NFH3 380 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 ZCCHC10Q8TBK6 192 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 SH3GL3Q99963 347 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 CCDC3Q9BQI4 270 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 DGCR6LQ9BY27 220 aa15.24■□□□□ 0.03
SNX6-202ENST00000396526 MPZL2O60487 215 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 POU3F3P20264 500 aaPredicted RBP15.23■□□□□ 0.03
SNX6-202ENST00000396526 GGT2P36268 569 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 FOXD4Q12950 439 aaPredicted RBP15.23■□□□□ 0.03
SNX6-202ENST00000396526 SYPL1Q16563 259 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 KLHL35Q6PF15 583 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 TMEM107Q6UX40 140 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 LINC00471Q8N535 108 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 ADAMTS15Q8TE58 950 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 BTBD2Q9BX70 525 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 DUSP21Q9H596 190 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 KLHL28Q9NXS3 571 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 ZNF99A8MXY4 864 aaPredicted RBP15.23■□□□□ 0.03
SNX6-202ENST00000396526 PRKRAO75569 313 aaKnown RBP15.23■□□□□ 0.03
SNX6-202ENST00000396526 EIF2S1P05198 315 aaKnown RBP15.23■□□□□ 0.03
SNX6-202ENST00000396526 C16orf62Q7Z3J2 963 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 TSEN54Q7Z6J9 526 aaKnown RBP15.23■□□□□ 0.03
SNX6-202ENST00000396526 B3GNT8Q7Z7M8 397 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 LRRC25Q8N386 305 aaPredicted RBP15.23■□□□□ 0.03
SNX6-202ENST00000396526 AQP11Q8NBQ7 271 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 VANGL1Q8TAA9 524 aaPredicted RBP15.23■□□□□ 0.03
SNX6-202ENST00000396526 MYDGFQ969H8 173 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 COL26A1Q96A83 441 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 OR2A5Q96R48 311 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 MGAT4BQ9UQ53 548 aa15.23■□□□□ 0.03
SNX6-202ENST00000396526 SPTY2D1-AS1A0A0U1RR47 76 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 J3KTA2 159 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 MBTPS2O43462 519 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 NARSO43776 548 aaKnown RBP15.22■□□□□ 0.03
SNX6-202ENST00000396526 UGT2B17O75795 530 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 ALOX12P18054 663 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 TNFRSF17Q02223 184 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 DEFB134Q4QY38 66 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 PARP8Q8N3A8 854 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 FAM46DQ8NEK8 389 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 OR5D16Q8NGK9 328 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 MIPOL1Q8TD10 442 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 UCN3Q969E3 161 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 FNDC11Q9BVV2 318 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 PRDM9Q9NQV7 894 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 SLC2A4RGQ9NR83 387 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 WSB2Q9NYS7 404 aaPredicted RBP15.22■□□□□ 0.03
SNX6-202ENST00000396526 DUSP12Q9UNI6 340 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 PCDHGB1Q9Y5G3 927 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 GPC6Q9Y625 555 aaPredicted RBP15.22■□□□□ 0.03
SNX6-202ENST00000396526 A0A0J9YY10 115 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 FAAHO00519 579 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 NDUFS2O75306 463 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 IGHV4-34P06331 123 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 ALPPL2P10696 532 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 CD247P20963 164 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 ST13P50502 369 aaKnown RBP15.22■□□□□ 0.03
SNX6-202ENST00000396526 XKP51811 444 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 GTPBP3Q969Y2 492 aaKnown RBP15.22■□□□□ 0.03
SNX6-202ENST00000396526 ELP4Q96EB1 424 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 PSD2Q9BQI7 771 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 YIPF4Q9BSR8 244 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 DCUN1D5Q9BTE7 237 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 NMNAT1Q9HAN9 279 aaPredicted RBP15.22■□□□□ 0.03
SNX6-202ENST00000396526 CES1P1Q9UKY3 287 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 DOLKQ9UPQ8 538 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 PCDH17O14917 1159 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 CASC3O15234 703 aaKnown RBP15.22■□□□□ 0.03
SNX6-202ENST00000396526 ASNA1O43681 348 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 OR10H3O60404 316 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 ADAP00813 363 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 PCSK6P29122 969 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 UGT2B15P54855 530 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 GPR19Q15760 415 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 GJD3Q8N144 294 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 NR4A3Q92570 626 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 FCRL4Q96PJ5 515 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 LHPPQ9H008 270 aa15.22■□□□□ 0.03
SNX6-202ENST00000396526 LIN28AQ9H9Z2 209 aaKnown RBP15.22■□□□□ 0.03
SNX6-202ENST00000396526 WASHC1A8K0Z3 465 aa15.21■□□□□ 0.03
SNX6-202ENST00000396526 AXIN1O15169 862 aa15.21■□□□□ 0.03
SNX6-202ENST00000396526 SKP1P63208 163 aa15.21■□□□□ 0.03
SNX6-202ENST00000396526 SLC35A2P78381 396 aa15.21■□□□□ 0.03
SNX6-202ENST00000396526 PARGQ86W56 976 aa15.21■□□□□ 0.03
SNX6-202ENST00000396526 TM4SF19Q96DZ7 209 aa15.21■□□□□ 0.03
SNX6-202ENST00000396526 DOK1Q99704 481 aa15.21■□□□□ 0.03
SNX6-202ENST00000396526 ACTRT3Q9BYD9 372 aa15.21■□□□□ 0.03
SNX6-202ENST00000396526 LMAN1LQ9HAT1 526 aa15.21■□□□□ 0.03
SNX6-202ENST00000396526 A0A1W2PPC4 97 aa15.21■□□□□ 0.03
SNX6-202ENST00000396526 H3BMQ9 156 aa15.21■□□□□ 0.03
SNX6-202ENST00000396526 B4GALT2O60909 372 aa15.21■□□□□ 0.03
SNX6-202ENST00000396526 CTSKP43235 329 aa15.21■□□□□ 0.03
SNX6-202ENST00000396526 GSSP48637 474 aa15.21■□□□□ 0.03
SNX6-202ENST00000396526 PXNP49023 591 aaPredicted RBP15.21■□□□□ 0.03
SNX6-202ENST00000396526 PPM1FP49593 454 aaPredicted RBP15.21■□□□□ 0.03
SNX6-202ENST00000396526 PUM1Q14671 1186 aaKnown RBP eCLIP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms