RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CLPSP04118 112 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 HPNP05981 417 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 CTSSP25774 331 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 ADSLP30566 484 aaPredicted RBP19.33■□□□□ 0.68
TRAF4-203ENST00000394925 HOXC12P31275 282 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 BUD31P41223 144 aaPredicted RBP19.33■□□□□ 0.68
TRAF4-203ENST00000394925 MASP1P48740 699 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 ILF2Q12905 390 aaKnown RBP19.33■□□□□ 0.68
TRAF4-203ENST00000394925 RPS6KA2Q15349 733 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 TOMM20Q15388 145 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 VASNQ6EMK4 673 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 HUS1BQ8NHY5 278 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 GNRHR2Q96P88 292 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 CENPKQ9BS16 269 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 YIPF4Q9BSR8 244 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 UBQLN3Q9H347 655 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 ALG9Q9H6U8 611 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 NEUROD4Q9HD90 331 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 RYDENQ9NUL5 291 aaKnown RBP19.33■□□□□ 0.68
TRAF4-203ENST00000394925 TXNDC16Q9P2K2 825 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 OPTCQ9UBM4 332 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 JMJD1CQ15652 2540 aa19.33■□□□□ 0.68
TRAF4-203ENST00000394925 C2orf92A0A1B0GVN3 265 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 CD8B2A6NJW9 211 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 CAPN14A8MX76 684 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 BMP7P18075 431 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 SSTR4P31391 388 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 SORDQ00796 357 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 POU4F3Q15319 338 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 EIPR1Q53HC9 387 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 FNDC7Q5VTL7 733 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 GRHL2Q6ISB3 625 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 PACS2Q86VP3 889 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 ZCCHC7Q8N3Z6 543 aaKnown RBP19.32■□□□□ 0.68
TRAF4-203ENST00000394925 ZNF441Q8N8Z8 693 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 SPPL2AQ8TCT8 520 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 UBXN10Q96LJ8 280 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 MTERF1Q99551 399 aaKnown RBP19.32■□□□□ 0.68
TRAF4-203ENST00000394925 GPR22Q99680 433 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 UGT2B28Q9BY64 529 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 ADGRE2Q9UHX3 823 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 C15orf41Q9Y2V0 281 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 NPFFR2Q9Y5X5 522 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 IKBKGQ9Y6K9 419 aa19.32■□□□□ 0.68
TRAF4-203ENST00000394925 MBD3L4A6NDZ8 208 aaPredicted RBP19.31■□□□□ 0.68
TRAF4-203ENST00000394925 MBD3L3A6NE82 208 aaPredicted RBP19.31■□□□□ 0.68
TRAF4-203ENST00000394925 MBD3L5A6NJ08 208 aaPredicted RBP19.31■□□□□ 0.68
TRAF4-203ENST00000394925 SUPT3HB4E1H0 165 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 K7EPI3 171 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 SUPT3HO75486 399 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 SNX4O95219 450 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 INHBBP09529 407 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 SSTR1P30872 391 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 OPRM1P35372 400 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 DCAF7P61962 342 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 DCST1Q5T197 706 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 HLA-DQA1Q5Y7H0 255 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 MYLK4Q86YV6 388 aaPredicted RBP19.31■□□□□ 0.68
TRAF4-203ENST00000394925 MBD3L2Q8NHZ7 208 aaPredicted RBP19.31■□□□□ 0.68
TRAF4-203ENST00000394925 STAG3L4Q8TBR4 150 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 UCN3Q969E3 161 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 WDYHV1Q96HA8 205 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 RBBP8Q99708 897 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 ANGPTL4Q9BY76 406 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 SNX15Q9NRS6 342 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 TEX10Q9NXF1 929 aaPredicted RBP19.31■□□□□ 0.68
TRAF4-203ENST00000394925 NUDT4Q9NZJ9 180 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 ASB4Q9Y574 426 aa19.31■□□□□ 0.68
TRAF4-203ENST00000394925 A0A1W2PR48 441 aa19.3■□□□□ 0.68
TRAF4-203ENST00000394925 UBXN8O00124 270 aa19.3■□□□□ 0.68
TRAF4-203ENST00000394925 EEDO75530 441 aaKnown RBP19.3■□□□□ 0.68
TRAF4-203ENST00000394925 NR2F6P10588 404 aa19.3■□□□□ 0.68
TRAF4-203ENST00000394925 PIK3CBP42338 1070 aa19.3■□□□□ 0.68
TRAF4-203ENST00000394925 RAB10P61026 200 aa19.3■□□□□ 0.68
TRAF4-203ENST00000394925 RPS13P62277 151 aaKnown RBP19.3■□□□□ 0.68
TRAF4-203ENST00000394925 PCDH1Q08174 1060 aa19.3■□□□□ 0.68
TRAF4-203ENST00000394925 PCBP2Q15366 365 aaKnown RBP eCLIP19.3■□□□□ 0.684e-7■■■□□ 17.9
TRAF4-203ENST00000394925 NHSL2Q5HYW2 709 aa19.3■□□□□ 0.68
TRAF4-203ENST00000394925 WIPI1Q5MNZ9 446 aaPredicted RBP19.3■□□□□ 0.68
TRAF4-203ENST00000394925 CLEC9AQ6UXN8 241 aa19.3■□□□□ 0.68
TRAF4-203ENST00000394925 C9orf106Q8NAJ2 232 aa19.3■□□□□ 0.68
TRAF4-203ENST00000394925 PYROXD1Q8WU10 500 aa19.3■□□□□ 0.68
TRAF4-203ENST00000394925 CDKL2Q92772 493 aa19.3■□□□□ 0.68
TRAF4-203ENST00000394925 ABTB1Q969K4 478 aaPredicted RBP19.3■□□□□ 0.68
TRAF4-203ENST00000394925 TP53INP1Q96A56 240 aa19.3■□□□□ 0.68
TRAF4-203ENST00000394925 CPNE1Q99829 537 aa19.3■□□□□ 0.68
TRAF4-203ENST00000394925 CALHM2Q9HA72 323 aa19.3■□□□□ 0.68
TRAF4-203ENST00000394925 LYARQ9NX58 379 aaKnown RBP19.3■□□□□ 0.68
TRAF4-203ENST00000394925 JKAMPQ9P055 326 aa19.3■□□□□ 0.68
TRAF4-203ENST00000394925 FN1P02751 2386 aaKnown RBP19.3■□□□□ 0.68
TRAF4-203ENST00000394925 A0A1W2PS29 197 aa19.29■□□□□ 0.68
TRAF4-203ENST00000394925 EFCAB8A8MWE9 144 aa19.29■□□□□ 0.68
TRAF4-203ENST00000394925 GNB5O14775 395 aa19.29■□□□□ 0.68
TRAF4-203ENST00000394925 TMPRSS11DO60235 418 aa19.29■□□□□ 0.68
TRAF4-203ENST00000394925 IL18BPO95998 194 aa19.29■□□□□ 0.68
TRAF4-203ENST00000394925 HRGP04196 525 aa19.29■□□□□ 0.68
TRAF4-203ENST00000394925 FAM58BPP0C7Q3 252 aa19.29■□□□□ 0.68
TRAF4-203ENST00000394925 SLC35E2BP0CK96 405 aa19.29■□□□□ 0.68
TRAF4-203ENST00000394925 SLC35E2P0CK97 266 aa19.29■□□□□ 0.68
TRAF4-203ENST00000394925 TMIGD3P0DMS9 266 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms