RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 LMO7DNF2Z398 122 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 RNASET2O00584 256 aaKnown RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 P2RX6O15547 441 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 TNFSF14O43557 240 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 NOBOXO60393 691 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 TIPRLO75663 272 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 UBXN7O94888 489 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 EPN2O95208 641 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 C9P02748 559 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 MT-ND1P03886 318 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ANXA6P08133 673 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ZNF888P0CJ79 500 aaPredicted RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 MYF5P13349 255 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 HIST1H1TP22492 207 aaPredicted RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 ATP5A1P25705 553 aaKnown RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 CERS1P27544 350 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 PCYT1AP49585 367 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 CCT8P50990 548 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 GABARAPL2P60520 117 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 HNRNPKP61978 463 aaKnown RBP eCLIP6.56□□□□□ -1.36
RTN4-205ENST00000394609 RPS15AP62244 130 aaKnown RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 BTN3A2P78410 334 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 CSTF1Q05048 431 aaKnown RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 SIGLEC14Q08ET2 396 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 CDC20Q12834 499 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 BNIP3Q12983 259 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 PMS2P3Q13401 168 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 SLC9A5Q14940 896 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 HEPACAMQ14CZ8 416 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 AASDHQ4L235 1098 aaPredicted RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 RBM48Q5RL73 367 aaKnown RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 HMBOX1Q6NT76 420 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ARMC6Q6NXE6 501 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ZCCHC8Q6NZY4 707 aaKnown RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 ANGPTL8Q6UXH0 198 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 IKBIPQ70UQ0 350 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 BTLAQ7Z6A9 289 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ASPGQ86U10 573 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 OOSP2Q86WS3 158 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 DHRSXQ8N5I4 330 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 OR2L5Q8NG80 312 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 OR5AK3PQ8NH89 298 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ZCCHC10Q8TBK6 192 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 EXOSC8Q96B26 276 aaKnown RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 PPWD1Q96BP3 646 aaKnown RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 TAMM41Q96BW9 452 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 KCNC2Q96PR1 638 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ALPK1Q96QP1 1244 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 SEPHS2Q99611 448 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 DCUN1D5Q9BTE7 237 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 SARGQ9BW04 601 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 TWSG1Q9GZX9 223 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 RAD21L1Q9H4I0 556 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 TPT1P8Q9HAU6 139 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 IL21RQ9HBE5 538 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 CPNE5Q9HCH3 593 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 PRDM7Q9NQW5 492 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 FBXO8Q9NRD0 319 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ANKMY1Q9P2S6 941 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 BTNL2Q9UIR0 455 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 FBXW2Q9UKT8 454 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ACSL6Q9UKU0 697 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 MAPRE3Q9UPY8 281 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ATG4BQ9Y4P1 393 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 PCDHGA2Q9Y5H1 932 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ENTPD2Q9Y5L3 495 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 SNX11Q9Y5W9 270 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 SNX8Q9Y5X2 465 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 TDRD6O60522 2096 aaKnown RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 MN1Q10571 1320 aaPredicted RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 A0A0J9YY10 115 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 A0A1W2PR48 441 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 TCRBV5S2A0A599 114 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 C1orf226A1L170 272 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 FAM221BA6H8Z2 402 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 EVPLLA8MZ36 301 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 H0YGG7 62 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 CXCR6O00574 342 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 SOCS2O14508 198 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 PGRMC2O15173 223 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 CLOCKO15516 846 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 LAMTOR5O43504 91 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 HCRTR1O43613 425 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 DNAJB6O75190 326 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 GMNNO75496 209 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 PIAS2O75928 621 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 OXSR1O95747 527 aaPredicted RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 ST6GAL1P15907 406 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 HOXB6P17509 224 aaKnown RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 GGT1P19440 569 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 FUT4P22083 530 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 PSMA4P25789 261 aaKnown RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 GSTM2P28161 218 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ALDH4A1P30038 563 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 PTGER1P34995 402 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 RPL3P39023 403 aaKnown RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 RXRGP48443 463 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 GZMMP51124 257 aa6.56□□□□□ -1.36
RTN4-205ENST00000394609 ARF3P61204 181 aaPredicted RBP6.56□□□□□ -1.36
RTN4-205ENST00000394609 STXBP1P61764 594 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms