RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ZNF689Q96CS4 500 aaPredicted RBP15.33■□□□□ 0.05
PCDH1-203ENST00000394536 SECISBP2Q96T21 854 aaKnown RBP15.33■□□□□ 0.05
PCDH1-203ENST00000394536 ADAP2Q9NPF8 381 aa15.33■□□□□ 0.05
PCDH1-203ENST00000394536 PCDHGA3Q9Y5H0 932 aa15.33■□□□□ 0.05
PCDH1-203ENST00000394536 C1orf105O95561 183 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 LATS1O95835 1130 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 FURINP09958 794 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 CD6P30203 668 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 SLC3A1Q07837 685 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 SLC30A6Q6NXT4 461 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 SLC27A4Q6P1M0 643 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 LIPIQ6XZB0 460 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 CCDC32Q9BV29 185 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 MED28Q9H204 178 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 KRCC1Q9NPI7 259 aaPredicted RBP15.33■□□□□ 0.04
PCDH1-203ENST00000394536 CDV3Q9UKY7 258 aaKnown RBP15.33■□□□□ 0.04
PCDH1-203ENST00000394536 YARS2Q9Y2Z4 477 aaKnown RBP15.33■□□□□ 0.04
PCDH1-203ENST00000394536 KLK4Q9Y5K2 254 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 IRAK3Q9Y616 596 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 NPPBP16860 134 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 PTPN2P17706 415 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 UGT2B10P36537 528 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 TAP2Q03519 686 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 FXNQ16595 210 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 CHTF18Q8WVB6 975 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 RFKQ969G6 155 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 TXNDC15Q96J42 360 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 KLHL42Q9P2K6 505 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 PCDHGA2Q9Y5H1 932 aa15.33■□□□□ 0.04
PCDH1-203ENST00000394536 HTR3DQ70Z44 454 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 OR10G6Q8NH81 332 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 APH1BQ8WW43 257 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 GABARAPL1Q9H0R8 117 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 ABCG4Q9H172 646 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 SPATA6Q9NWH7 488 aaPredicted RBP15.32■□□□□ 0.04
PCDH1-203ENST00000394536 MUTYHQ9UIF7 546 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 GTF2A1LQ9UNN4 478 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 ZFR2Q9UPR6 939 aaKnown RBP15.32■□□□□ 0.04
PCDH1-203ENST00000394536 SIP14410 1827 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 NDUFS4O43181 175 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 OR5F1O95221 314 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 GPR4P46093 362 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 SLC9A3P48764 834 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 PRR5P85299 388 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 ZNF433Q8N7K0 673 aaPredicted RBP15.32■□□□□ 0.04
PCDH1-203ENST00000394536 SLC37A3Q8NCC5 494 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 CCDC59Q9P031 241 aaKnown RBP15.32■□□□□ 0.04
PCDH1-203ENST00000394536 TNFRSF10DQ9UBN6 386 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 OR51B4Q9Y5P0 310 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 A0A1W2PQ72 361 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 WASH3PC4AMC7 463 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 DHFRP00374 187 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 ARAFP10398 606 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 LAMP2P13473 410 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 MAP2K3P46734 347 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 MTNR1AP48039 350 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 PODNL1Q6PEZ8 512 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 FAM124AQ86V42 546 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 KLBQ86Z14 1044 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 SAMD11Q96NU1 681 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 FYTTD1Q96QD9 318 aaKnown RBP15.32■□□□□ 0.04
PCDH1-203ENST00000394536 CUEDC1Q9NWM3 386 aaPredicted RBP15.32■□□□□ 0.04
PCDH1-203ENST00000394536 HCN2Q9UL51 889 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 SATB2Q9UPW6 733 aa15.32■□□□□ 0.04
PCDH1-203ENST00000394536 WASHC1A8K0Z3 465 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 C1QTNF3-AMACRE9PGA6 284 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 ZNF821O75541 412 aaPredicted RBP15.31■□□□□ 0.04
PCDH1-203ENST00000394536 ALPPP05187 535 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 APEX1P27695 318 aaKnown RBP15.31■□□□□ 0.04
PCDH1-203ENST00000394536 GIPRP48546 466 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 MAN2A2P49641 1150 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 ID2Q02363 134 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 WASH2PQ6VEQ5 465 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 OR8K5Q8NH50 307 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 WDR20Q8TBZ3 569 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 PIGKQ92643 395 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 TRMT2BQ96GJ1 504 aaKnown RBP15.31■□□□□ 0.04
PCDH1-203ENST00000394536 FAM46AQ96IP4 442 aaKnown RBP15.31■□□□□ 0.04
PCDH1-203ENST00000394536 ZNF514Q96K75 400 aaPredicted RBP15.31■□□□□ 0.04
PCDH1-203ENST00000394536 CLEC4MQ9H2X3 399 aaPredicted RBP15.31■□□□□ 0.04
PCDH1-203ENST00000394536 TAS2R7Q9NYW3 318 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 ING4Q9UNL4 249 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 DAPL1A0PJW8 107 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 FAM172BPA6NC97 362 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 PAK4O96013 591 aaPredicted RBP15.31■□□□□ 0.04
PCDH1-203ENST00000394536 TGFBR2P37173 567 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 CENPAP49450 140 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 TMEM107Q6UX40 140 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 LACC1Q8IV20 430 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 SLC30A8Q8IWU4 369 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 SYT14Q8NB59 555 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 TREX2Q9BQ50 279 aaPredicted RBP15.31■□□□□ 0.04
PCDH1-203ENST00000394536 HS3ST2Q9Y278 367 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 ALPK2Q86TB3 2170 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 DSCR3O14972 297 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 SLC31A1O15431 190 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 NCR1O76036 304 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 ABLIM3O94929 683 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 HLA-DPB1P04440 258 aa15.31■□□□□ 0.04
PCDH1-203ENST00000394536 MRPL3P09001 348 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms