RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 APOBEC4Q8WW27 367 aaKnown RBP18.52■□□□□ 0.56
RCCD1-201ENST00000394258 RAB7BQ96AH8 199 aa18.52■□□□□ 0.56
RCCD1-201ENST00000394258 ZBED6CLQ96FA7 236 aaPredicted RBP18.52■□□□□ 0.56
RCCD1-201ENST00000394258 TREX2Q9BQ50 279 aaPredicted RBP18.52■□□□□ 0.56
RCCD1-201ENST00000394258 ZAR1LA6NP61 321 aa18.52■□□□□ 0.55
RCCD1-201ENST00000394258 ENTPD6O75354 484 aa18.52■□□□□ 0.55
RCCD1-201ENST00000394258 ALOX5P09917 674 aa18.52■□□□□ 0.55
RCCD1-201ENST00000394258 CKMT1AP12532 417 aa18.52■□□□□ 0.55
RCCD1-201ENST00000394258 CST6Q15828 149 aa18.52■□□□□ 0.55
RCCD1-201ENST00000394258 NDUFAF5Q5TEU4 345 aa18.52■□□□□ 0.55
RCCD1-201ENST00000394258 AICDAQ9GZX7 198 aa18.52■□□□□ 0.55
RCCD1-201ENST00000394258 OR51I1Q9H343 314 aa18.52■□□□□ 0.55
RCCD1-201ENST00000394258 IGFLR1Q9H665 355 aa18.52■□□□□ 0.55
RCCD1-201ENST00000394258 NEUROD4Q9HD90 331 aa18.52■□□□□ 0.55
RCCD1-201ENST00000394258 A4GALTQ9NPC4 353 aa18.52■□□□□ 0.55
RCCD1-201ENST00000394258 SEMA3GQ9NS98 782 aa18.52■□□□□ 0.55
RCCD1-201ENST00000394258 STON1Q9Y6Q2 735 aa18.52■□□□□ 0.55
RCCD1-201ENST00000394258 C2orf16Q68DN1 1984 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 M0R3H8 397 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 NME6O75414 186 aaPredicted RBP18.51■□□□□ 0.55
RCCD1-201ENST00000394258 DLGAP3O95886 979 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 MAT2AP31153 395 aaKnown RBP18.51■□□□□ 0.55
RCCD1-201ENST00000394258 RUNX3Q13761 415 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 OR4C11Q6IEV9 310 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 ZNF793Q6ZN11 406 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 WDR36Q8NI36 951 aaKnown RBP18.51■□□□□ 0.55
RCCD1-201ENST00000394258 PLA2G2FQ9BZM2 168 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 DNAJC27Q9NZQ0 273 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 C8orf89P0DMQ9 161 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 SEC13P55735 322 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 LSM11P83369 360 aaKnown RBP eCLIP18.51■□□□□ 0.553e-6■■■□□ 16.4
RCCD1-201ENST00000394258 DCST1Q5T197 706 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 PARP16Q8N5Y8 322 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 POC5Q8NA72 575 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 OR2A1Q8NGT9 310 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 QRFPRQ96P65 431 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 MGLLQ99685 303 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 MAPKAP1Q9BPZ7 522 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 KCNS3Q9BQ31 491 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 GLIPR2Q9H4G4 154 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 FZD3Q9NPG1 666 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 ZCCHC3Q9NUD5 404 aaKnown RBP18.51■□□□□ 0.55
RCCD1-201ENST00000394258 CLEC2DQ9UHP7 191 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 SCN3AQ9NY46 2000 aa18.51■□□□□ 0.55
RCCD1-201ENST00000394258 NUP210Q8TEM1 1887 aaPredicted RBP18.51■□□□□ 0.55
RCCD1-201ENST00000394258 A0A1W2PS29 197 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 PDZK1P1A8MUH7 402 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 C5orf67F2Z3F1 127 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 KIAA0513O60268 411 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 NR2F1P10589 423 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 GPR19Q15760 415 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 AKAP14Q86UN6 197 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 TP53I13Q8NBR0 393 aaPredicted RBP18.5■□□□□ 0.55
RCCD1-201ENST00000394258 OR8K5Q8NH50 307 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 SLC6A17Q9H1V8 727 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 CLN6Q9NWW5 311 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 KCND3Q9UK17 655 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 CEP290O15078 2479 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 KIF26AQ9ULI4 1882 aaPredicted RBP18.5■□□□□ 0.55
RCCD1-201ENST00000394258 SNPHO15079 494 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 ELAVL4P26378 380 aaKnown RBP18.5■□□□□ 0.55
RCCD1-201ENST00000394258 NCBP2P52298 156 aaKnown RBP eCLIP18.5■□□□□ 0.551e-13■■■■□ 24.7
RCCD1-201ENST00000394258 PRDX1Q06830 199 aaKnown RBP18.5■□□□□ 0.55
RCCD1-201ENST00000394258 MEX3DQ86XN8 651 aaKnown RBP18.5■□□□□ 0.55
RCCD1-201ENST00000394258 AMER2Q8N7J2 671 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 CAMK1GQ96NX5 476 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 UCK2Q9BZX2 261 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 PCBD2Q9H0N5 130 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 MVB12BQ9H7P6 319 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 ANKRA2Q9H9E1 313 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 ZFR2Q9UPR6 939 aaKnown RBP18.5■□□□□ 0.55
RCCD1-201ENST00000394258 RWDD3Q9Y3V2 267 aa18.5■□□□□ 0.55
RCCD1-201ENST00000394258 MUC22E2RYF6 1773 aaPredicted RBP18.49■□□□□ 0.55
RCCD1-201ENST00000394258 LRIT2A6NDA9 550 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 C4orf51C9J302 202 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 ARHGAP33O14559 1287 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 PGRMC2O15173 223 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 H1F0P07305 194 aaKnown RBP18.49■□□□□ 0.55
RCCD1-201ENST00000394258 TNNI3P19429 210 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 FCARP24071 287 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 HSD17B2P37059 387 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 LIMK1P53667 647 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 TARDBPQ13148 414 aaKnown RBP eCLIP18.49■□□□□ 0.554e-7■□□□□ 10
RCCD1-201ENST00000394258 SSX1Q16384 188 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 FBXO46Q6PJ61 603 aaPredicted RBP18.49■□□□□ 0.55
RCCD1-201ENST00000394258 SLC30A8Q8IWU4 369 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 HERVK_113Q902F9 699 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 EFHD2Q96C19 240 aaPredicted RBP18.49■□□□□ 0.55
RCCD1-201ENST00000394258 TEX101Q9BY14 249 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 REV1Q9UBZ9 1251 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 GPSM3Q9Y4H4 160 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 EYSQ5T1H1 3165 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 ERI3O43414 337 aaKnown RBP18.49■□□□□ 0.55
RCCD1-201ENST00000394258 ALOX12P18054 663 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 BCL6P41182 706 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 SOX3P41225 446 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 LRIT3Q3SXY7 679 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 CCDC116Q8IYX3 515 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 IQCF1Q8N6M8 205 aa18.49■□□□□ 0.55
RCCD1-201ENST00000394258 MINDY2Q8NBR6 621 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms