RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 PCLAFQ15004 111 aa28.43■■■□□ 2.14
CMTM4-202ENST00000394106 MAGED4Q96JG8 741 aa28.43■■■□□ 2.14
CMTM4-202ENST00000394106 EBPLQ9BY08 206 aa28.43■■■□□ 2.14
CMTM4-202ENST00000394106 WWTR1Q9GZV5 400 aa28.43■■■□□ 2.14
CMTM4-202ENST00000394106 TNFRSF12AQ9NP84 129 aa28.43■■■□□ 2.14
CMTM4-202ENST00000394106 PLEKHB1Q9UF11 243 aaPredicted RBP28.43■■■□□ 2.14
CMTM4-202ENST00000394106 PSME2Q9UL46 239 aa28.43■■■□□ 2.14
CMTM4-202ENST00000394106 OR6C76A6NM76 312 aa28.42■■■□□ 2.14
CMTM4-202ENST00000394106 H3BQF6 201 aa28.42■■■□□ 2.14
CMTM4-202ENST00000394106 SPAG7O75391 227 aa28.42■■■□□ 2.14
CMTM4-202ENST00000394106 IL3P08700 152 aa28.42■■■□□ 2.14
CMTM4-202ENST00000394106 EBPQ15125 230 aaKnown RBP28.42■■■□□ 2.14
CMTM4-202ENST00000394106 IMPG1Q17R60 797 aa28.42■■■□□ 2.14
CMTM4-202ENST00000394106 FAM180BQ6P0A1 224 aa28.42■■■□□ 2.14
CMTM4-202ENST00000394106 HEY2Q9UBP5 337 aa28.42■■■□□ 2.14
CMTM4-202ENST00000394106 DLGAP4Q9Y2H0 992 aa28.42■■■□□ 2.14
CMTM4-202ENST00000394106 SERTM1A2A2V5 107 aa28.41■■■□□ 2.14
CMTM4-202ENST00000394106 SLC19A2O60779 497 aa28.41■■■□□ 2.14
CMTM4-202ENST00000394106 NADKO95544 446 aaPredicted RBP28.41■■■□□ 2.14
CMTM4-202ENST00000394106 CSNK2A2P19784 350 aaPredicted RBP28.41■■■□□ 2.14
CMTM4-202ENST00000394106 TIA1P31483 386 aaKnown RBP eCLIP28.41■■■□□ 2.14
CMTM4-202ENST00000394106 PTGER1P34995 402 aa28.41■■■□□ 2.14
CMTM4-202ENST00000394106 HSF1Q00613 529 aa28.41■■■□□ 2.14
CMTM4-202ENST00000394106 ZNF800Q2TB10 664 aaPredicted RBP eCLIP28.41■■■□□ 2.14
CMTM4-202ENST00000394106 ZFP62Q8NB50 900 aaPredicted RBP28.41■■■□□ 2.14
CMTM4-202ENST00000394106 RELTQ969Z4 430 aa28.41■■■□□ 2.14
CMTM4-202ENST00000394106 SGCZQ96LD1 299 aa28.41■■■□□ 2.14
CMTM4-202ENST00000394106 FAM111AQ96PZ2 611 aa28.41■■■□□ 2.14
CMTM4-202ENST00000394106 BRINP2Q9C0B6 783 aa28.41■■■□□ 2.14
CMTM4-202ENST00000394106 SLC17A7Q9P2U7 560 aa28.41■■■□□ 2.14
CMTM4-202ENST00000394106 UTP20O75691 2785 aaKnown RBP28.4■■■□□ 2.14
CMTM4-202ENST00000394106 ICE1Q9Y2F5 2266 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 A0A0G2JMM0 328 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 C2orf92A0A1B0GVN3 265 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 A0A1W2PPB8 328 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 A0A1W2PRS3 328 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 PINLYPA6NC86 204 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 KIR3DP1A8MWS1 328 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 CASP6P55212 293 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 FUT7Q11130 342 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 GHDCQ8N2G8 530 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 MREGQ8N565 214 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 SLC15A4Q8N697 577 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 GOLM1Q8NBJ4 401 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 OR2M7Q8NG81 312 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 C16orf78Q8WTQ4 265 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 GATA5Q9BWX5 397 aaPredicted RBP28.4■■■□□ 2.14
CMTM4-202ENST00000394106 PFDN4Q9NQP4 134 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 SACM1LQ9NTJ5 587 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 UTS2RQ9UKP6 389 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 ZNF780BQ9Y6R6 833 aa28.4■■■□□ 2.14
CMTM4-202ENST00000394106 EML6Q6ZMW3 1958 aa28.39■■■□□ 2.14
CMTM4-202ENST00000394106 ZNHIT1O43257 154 aa28.39■■■□□ 2.14
CMTM4-202ENST00000394106 HS6ST1O60243 411 aa28.39■■■□□ 2.14
CMTM4-202ENST00000394106 TRIM13O60858 407 aa28.39■■■□□ 2.14
CMTM4-202ENST00000394106 P04436 131 aa28.39■■■□□ 2.14
CMTM4-202ENST00000394106 CA7P43166 264 aa28.39■■■□□ 2.14
CMTM4-202ENST00000394106 PLGLB1Q02325 96 aa28.39■■■□□ 2.14
CMTM4-202ENST00000394106 SPTAN1Q13813 2472 aaKnown RBP28.39■■■□□ 2.14
CMTM4-202ENST00000394106 ZNF791Q3KP31 576 aaPredicted RBP28.39■■■□□ 2.14
CMTM4-202ENST00000394106 HLA-DQA1Q5Y7H0 255 aa28.39■■■□□ 2.14
CMTM4-202ENST00000394106 CLEC6AQ6EIG7 209 aa28.39■■■□□ 2.14
CMTM4-202ENST00000394106 SPACA9Q96E40 222 aaPredicted RBP28.39■■■□□ 2.14
CMTM4-202ENST00000394106 SMC6Q96SB8 1091 aa28.39■■■□□ 2.14
CMTM4-202ENST00000394106 OR10A5Q9H207 317 aa28.39■■■□□ 2.14
CMTM4-202ENST00000394106 CCL21O00585 134 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 ZG16O60844 167 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 ANXA4P09525 319 aaPredicted RBP28.38■■■□□ 2.13
CMTM4-202ENST00000394106 CCL3P10147 92 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 UROSP10746 265 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 DRD2P14416 443 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 CNR1P21554 472 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 ALDH3A1P30838 453 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 NR0B1P51843 470 aaKnown RBP28.38■■■□□ 2.13
CMTM4-202ENST00000394106 DUSP2Q05923 314 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 HIST2H2BCQ6DN03 193 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 FAM111BQ6SJ93 734 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 LYPD8Q6UX82 237 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 FAM47EQ6ZV65 393 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 VWA5B2Q8N398 1253 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 ZNF615Q8N8J6 731 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 ADCY4Q8NFM4 1077 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 C16orf52Q8NHV5 167 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 CDC26Q8NHZ8 85 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 CNRIP1Q96F85 164 aaPredicted RBP28.38■■■□□ 2.13
CMTM4-202ENST00000394106 FIS1Q9Y3D6 152 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 CROCCQ5TZA2 2017 aa28.38■■■□□ 2.13
CMTM4-202ENST00000394106 SPTBN1Q01082 2364 aaKnown RBP28.37■■■□□ 2.13
CMTM4-202ENST00000394106 CDC40O60508 579 aaKnown RBP eCLIP28.37■■■□□ 2.13
CMTM4-202ENST00000394106 ATP1B1P05026 303 aa28.37■■■□□ 2.13
CMTM4-202ENST00000394106 ABOP16442 354 aa28.37■■■□□ 2.13
CMTM4-202ENST00000394106 C3AR1Q16581 482 aa28.37■■■□□ 2.13
CMTM4-202ENST00000394106 PRICKLE4Q2TBC4 344 aa28.37■■■□□ 2.13
CMTM4-202ENST00000394106 GALNT18Q6P9A2 607 aa28.37■■■□□ 2.13
CMTM4-202ENST00000394106 TRIM46Q7Z4K8 759 aa28.37■■■□□ 2.13
CMTM4-202ENST00000394106 SPPL2CQ8IUH8 684 aa28.37■■■□□ 2.13
CMTM4-202ENST00000394106 TAGAPQ8N103 731 aa28.37■■■□□ 2.13
CMTM4-202ENST00000394106 LRRC25Q8N386 305 aaPredicted RBP28.37■■■□□ 2.13
CMTM4-202ENST00000394106 FAM13CQ8NE31 585 aa28.37■■■□□ 2.13
CMTM4-202ENST00000394106 OR7G1Q8NGA0 311 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms