RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 E7ESA3 106 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 SEC31AO94979 1220 aaKnown RBP14.05□□□□□ -0.16
CHMP3-202ENST00000393773 BMP7P18075 431 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 CTSSP25774 331 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 ADSLP30566 484 aaPredicted RBP14.05□□□□□ -0.16
CHMP3-202ENST00000393773 GMPRP36959 345 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 AGFG1P52594 562 aaKnown RBP14.05□□□□□ -0.16
CHMP3-202ENST00000393773 SLC12A2P55011 1212 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 FBXW4P57775 412 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 ATP6V0D1P61421 351 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 PCDH1Q08174 1060 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 BIKQ13323 160 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 ZKSCAN8Q15776 578 aaPredicted RBP14.05□□□□□ -0.16
CHMP3-202ENST00000393773 DEPDC1Q5TB30 811 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 GRHL2Q6ISB3 625 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 CLEC9AQ6UXN8 241 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 TMEM64Q6YI46 380 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 GPR180Q86V85 440 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 SLC35F6Q8N357 371 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 ZCCHC7Q8N3Z6 543 aaKnown RBP14.05□□□□□ -0.16
CHMP3-202ENST00000393773 C9orf106Q8NAJ2 232 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 SPPL2AQ8TCT8 520 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 UBTD2Q8WUN7 234 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 UBE2E3Q969T4 207 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 WDYHV1Q96HA8 205 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 UBXN10Q96LJ8 280 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 TRIB1Q96RU8 372 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 GPR22Q99680 433 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 ANGPTL4Q9BY76 406 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 CD244Q9BZW8 370 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 NEUROD4Q9HD90 331 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 CD274Q9NZQ7 290 aa14.05□□□□□ -0.16
CHMP3-202ENST00000393773 FBN1P35555 2871 aaKnown RBP14.04□□□□□ -0.16
CHMP3-202ENST00000393773 A0A1W2PS29 197 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 WASHC1A8K0Z3 465 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 TP53I11O14683 189 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 IL18BPO95998 194 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 OPRM1P35372 400 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 PDIA2Q13087 525 aaKnown RBP14.04□□□□□ -0.16
CHMP3-202ENST00000393773 POU4F3Q15319 338 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 EIPR1Q53HC9 387 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 MRM1Q6IN84 353 aaKnown RBP14.04□□□□□ -0.16
CHMP3-202ENST00000393773 PRIMA1Q86XR5 153 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 TAGAPQ8N103 731 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 HUS1BQ8NHY5 278 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 RIT1Q92963 219 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 TSPAN17Q96FV3 270 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 COX4I2Q96KJ9 171 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 SECISBP2Q96T21 854 aaKnown RBP14.04□□□□□ -0.16
CHMP3-202ENST00000393773 EPB41L4BQ9H329 900 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 TEX10Q9NXF1 929 aaPredicted RBP14.04□□□□□ -0.16
CHMP3-202ENST00000393773 GALNT8Q9NY28 637 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 RNF112Q9ULX5 631 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 CSPG4Q6UVK1 2322 aa14.04□□□□□ -0.16
CHMP3-202ENST00000393773 HEATR5AQ86XA9 2040 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 COL6A5A8TX70 2615 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 A0A0A6YYD5 115 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 CXorf49A8MYA2 514 aaPredicted RBP14.03□□□□□ -0.16
CHMP3-202ENST00000393773 TMPRSS11DO60235 418 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 OR10H2O60403 315 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 EEDO75530 441 aaKnown RBP14.03□□□□□ -0.16
CHMP3-202ENST00000393773 TRAPPC6AO75865 159 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 SNX4O95219 450 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 ACSL3O95573 720 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 GPR75O95800 540 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 S100BP04271 92 aaPredicted RBP14.03□□□□□ -0.16
CHMP3-202ENST00000393773 NR2F6P10588 404 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 PTPN6P29350 595 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 SSTR4P31391 388 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 GALNSP34059 522 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 BUD31P41223 144 aaPredicted RBP14.03□□□□□ -0.16
CHMP3-202ENST00000393773 SLCO1A2P46721 670 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 RAP1GDS1P52306 607 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 NKX6-1P78426 367 aaPredicted RBP14.03□□□□□ -0.16
CHMP3-202ENST00000393773 ILF2Q12905 390 aaKnown RBP14.03□□□□□ -0.16
CHMP3-202ENST00000393773 DDX39BQ13838 428 aaKnown RBP14.03□□□□□ -0.16
CHMP3-202ENST00000393773 SF3B4Q15427 424 aaKnown RBP eCLIP14.03□□□□□ -0.16
CHMP3-202ENST00000393773 WIPI1Q5MNZ9 446 aaPredicted RBP14.03□□□□□ -0.16
CHMP3-202ENST00000393773 SYDE1Q6ZW31 735 aaPredicted RBP14.03□□□□□ -0.16
CHMP3-202ENST00000393773 SMPDL3BQ92485 455 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 TP53INP1Q96A56 240 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 RGMAQ96B86 450 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 TMEM41AQ96HV5 264 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 GNRHR2Q96P88 292 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 ATOH8Q96SQ7 321 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 RBBP8Q99708 897 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 YIPF4Q9BSR8 244 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 CALHM2Q9HA72 323 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 SNX15Q9NRS6 342 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 NUDT4Q9NZJ9 180 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 ASB4Q9Y574 426 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 NPFFR2Q9Y5X5 522 aa14.03□□□□□ -0.16
CHMP3-202ENST00000393773 ANK3Q12955 4377 aaKnown RBP14.03□□□□□ -0.16
CHMP3-202ENST00000393773 DSCAMO60469 2012 aa14.02□□□□□ -0.16
CHMP3-202ENST00000393773 C2orf92A0A1B0GVN3 265 aa14.02□□□□□ -0.17
CHMP3-202ENST00000393773 A0A1W2PR48 441 aa14.02□□□□□ -0.17
CHMP3-202ENST00000393773 GLOD5A6NK44 160 aa14.02□□□□□ -0.17
CHMP3-202ENST00000393773 AIFM1O95831 613 aa14.02□□□□□ -0.17
CHMP3-202ENST00000393773 TMIGD3P0DMS9 266 aaPredicted RBP14.02□□□□□ -0.17
CHMP3-202ENST00000393773 STMN1P16949 149 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms