RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 JUNP05412 331 aaKnown RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 TUBBP07437 444 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 CPMP14384 443 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 PORP16435 677 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 BGNP21810 368 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 NME2P22392 152 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 SOX18P35713 384 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 MEOX1P50221 254 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 NR0B1P51843 470 aaKnown RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 SLC37A1P57057 533 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 RPL38P63173 70 aaKnown RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 MRPS35P82673 323 aaKnown RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 HSF1Q00613 529 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 C2orf80Q0P641 193 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 MGAT2Q10469 447 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 EBPQ15125 230 aaKnown RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 CHI3L2Q15782 390 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 NNATQ16517 81 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 UGT3A2Q3SY77 523 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 GALNTL6Q49A17 601 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 SPIN4Q56A73 249 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 TNFAIP8L3Q5GJ75 292 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 RNFT1Q5M7Z0 435 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 ZNF324BQ6AW86 544 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 SLC25A25Q6KCM7 469 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 ANKRD26P1Q6NSI1 321 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 RPUSD3Q6P087 351 aaKnown RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 LRIG3Q6UXM1 1119 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 RNF111Q6ZNA4 994 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 Q6ZSR9 355 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 TRIM46Q7Z4K8 759 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 NUDCD3Q8IVD9 361 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 GALNT12Q8IXK2 581 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 DDIASQ8IXT1 998 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 ARMC10Q8N2F6 343 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 BCORP1Q8N888 145 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 ANKRD42Q8N9B4 389 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 OR5M3Q8NGP4 307 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 OR9A2Q8NGT5 310 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 CLHC1Q8NHS4 586 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 MGARPQ8TDB4 240 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 TWIST2Q8WVJ9 160 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 NR4A3Q92570 626 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 GFM2Q969S9 779 aaKnown RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 C11orf24Q96F05 449 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 CNRIP1Q96F85 164 aaPredicted RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 EGLN2Q96KS0 407 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 FRMD6Q96NE9 622 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 FAIM2Q9BWQ8 316 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 WWTR1Q9GZV5 400 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 DEPPQ9NTK1 212 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 HPF1Q9NWY4 346 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 SENP1Q9P0U3 644 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 ZDHHC2Q9UIJ5 367 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 EXO1Q9UQ84 846 aaKnown RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 ERVK-11Q9UQG0 969 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 DTX4Q9Y2E6 619 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 YARS2Q9Y2Z4 477 aaKnown RBP7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 TRAF6Q9Y4K3 522 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 DNAJC15Q9Y5T4 150 aa7.1□□□□□ -1.27
HMGB3P1-201ENST00000393368 MYO18BQ8IUG5 2567 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 ATP6AP2A0A1C7CYW4 349 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 SERTM1A2A2V5 107 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 SYNDIG1LA6NDD5 238 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 GOLGA6L10A6NI86 522 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 NPIPA5E9PKD4 350 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 RGS14O43566 566 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 AKAP10O43572 662 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 DYRK3O43781 588 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 GUCY1B2O75343 617 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 SEC22BO75396 215 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 ERLIN1O75477 346 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 ATP6AP2O75787 350 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 UNC5CO95185 931 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 CBX7O95931 251 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 CCL3P10147 92 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 EDN3P14138 238 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 PCSK2P16519 638 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 CSNK2A2P19784 350 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 S1PR1P21453 382 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 NAA20P61599 178 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 TRA2BP62995 288 aaKnown RBP7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 ZNF763Q0D2J5 394 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 ELOAQ14241 798 aaKnown RBP7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 KIAA0040Q15053 153 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 INAQ16352 499 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 PRICKLE4Q2TBC4 344 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 RFTN2Q52LD8 501 aaPredicted RBP7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 TRMT12Q53H54 448 aaKnown RBP7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 DESI1Q6ICB0 168 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 FAM71E1Q6IPT2 247 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 NOXRED1Q6NXP6 359 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 GALNT18Q6P9A2 607 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 LYPD8Q6UX82 237 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 SLC29A4Q7RTT9 530 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 TICAM1Q8IUC6 712 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 SULF2Q8IWU5 870 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 CCDC116Q8IYX3 515 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 PRR22Q8IZ63 422 aa7.09□□□□□ -1.27
HMGB3P1-201ENST00000393368 VWA5B2Q8N398 1253 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms