RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 ATOH1Q92858 354 aaPredicted RBP3.27□□□□□ -1.89
TRAV39-201ENST00000390466 YIPF5Q969M3 257 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 GTPBP3Q969Y2 492 aaKnown RBP3.27□□□□□ -1.89
TRAV39-201ENST00000390466 GIMAP5Q96F15 307 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 AHCYL2Q96HN2 611 aaKnown RBP3.27□□□□□ -1.89
TRAV39-201ENST00000390466 TPD52L3Q96J77 140 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 SUSD3Q96L08 255 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 ZSWIM3Q96MP5 696 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 KCTD7Q96MP8 289 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 FOPNLQ96NB1 174 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 ZNF582Q96NG8 517 aaPredicted RBP3.27□□□□□ -1.89
TRAV39-201ENST00000390466 FRG2BQ96QU4 278 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 IL4I1Q96RQ9 567 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 GPA33Q99795 319 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 USB1Q9BQ65 265 aaKnown RBP3.27□□□□□ -1.89
TRAV39-201ENST00000390466 ARHGAP9Q9BRR9 750 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 UTP23Q9BRU9 249 aaKnown RBP3.27□□□□□ -1.89
TRAV39-201ENST00000390466 TMEM175Q9BSA9 504 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 TSSK6Q9BXA6 273 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 EBPLQ9BY08 206 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 POLR2J2Q9GZM3 115 aaKnown RBP3.27□□□□□ -1.89
TRAV39-201ENST00000390466 MS4A7Q9GZW8 240 aaPredicted RBP3.27□□□□□ -1.89
TRAV39-201ENST00000390466 ABCG4Q9H172 646 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 SERHL2Q9H4I8 314 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 SLC32A1Q9H598 525 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 CDCP1Q9H5V8 836 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 BRD7Q9NPI1 651 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 C11orf16Q9NQ32 467 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 EXOSC3Q9NQT5 275 aaKnown RBP3.27□□□□□ -1.89
TRAV39-201ENST00000390466 NPDC1Q9NQX5 325 aaPredicted RBP3.27□□□□□ -1.89
TRAV39-201ENST00000390466 CYSLTR2Q9NS75 346 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 ZNF275Q9NSD4 429 aaPredicted RBP3.27□□□□□ -1.89
TRAV39-201ENST00000390466 SDHAF2Q9NX18 166 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 IMPAD1Q9NX62 359 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 ING3Q9NXR8 418 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 TAS2R7Q9NYW3 318 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 FLRT1Q9NZU1 646 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 ZMAT5Q9UDW3 170 aaKnown RBP3.27□□□□□ -1.89
TRAV39-201ENST00000390466 ENOPH1Q9UHY7 261 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 TEKT2Q9UIF3 430 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 KIF25Q9UIL4 384 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 MBD1Q9UIS9 605 aaPredicted RBP3.27□□□□□ -1.89
TRAV39-201ENST00000390466 GMEB2Q9UKD1 530 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 FBXW2Q9UKT8 454 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 POMT2Q9UKY4 750 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 HCN2Q9UL51 889 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 RAB23Q9ULC3 237 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 FZD4Q9ULV1 537 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 MGAT4AQ9UM21 535 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 SSR3Q9UNL2 185 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 ENTPD4Q9Y227 616 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 LIPT1Q9Y234 373 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 PRELID3BQ9Y3B1 194 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 ZNF175Q9Y473 711 aa3.27□□□□□ -1.89
TRAV39-201ENST00000390466 PHF3Q92576 2039 aaKnown RBP3.27□□□□□ -1.89
TRAV39-201ENST00000390466 CPAMD8Q8IZJ3 1885 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 TMEM131Q92545 1883 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 GLYATL1P3A0A0U1RQE8 302 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 A0A1B0GVI7 797 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 FAM240BA0A1B0GVZ2 78 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 A0A1W2PPL8 197 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 TRBC2A0A5B9 178 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 PRAMEF27A3QJZ7 478 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 MTMR11A4FU01 709 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 ARL5CA6NH57 179 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 CASTOR2A6NHX0 329 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 ZNF98A6NK75 572 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 CCDC85CA6NKD9 419 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 MPTX1A8MV57 137 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 UPK3BL1B0FP48 263 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 ISM1B1AKI9 464 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 UPK3BL2E5RIL1 263 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 F8W810 466 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 GFYI3L273 518 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 CACNB4O00305 520 aaPredicted RBP3.26□□□□□ -1.89
TRAV39-201ENST00000390466 BTN3A3O00478 584 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 GABRPO00591 440 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 PRRG1O14668 218 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 NPC1O15118 1278 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 INSIG1O15503 277 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 KDELR3O43731 214 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 UGDHO60701 494 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 GALR3O60755 368 aaPredicted RBP3.26□□□□□ -1.89
TRAV39-201ENST00000390466 STK16O75716 305 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 SC5DO75845 299 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 NCR1O76036 304 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 DDNO94850 711 aaPredicted RBP3.26□□□□□ -1.89
TRAV39-201ENST00000390466 SOX14O95416 240 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 RAB36O95755 333 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 GUCA1CO95843 209 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 WDPCPO95876 746 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 HPXP02790 462 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 LPLP06858 475 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 PRKAR1AP10644 381 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 ACP2P11117 423 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 SLC2A2P11168 524 aaPredicted RBP3.26□□□□□ -1.89
TRAV39-201ENST00000390466 ETFAP13804 333 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 EPB42P16452 691 aa3.26□□□□□ -1.89
TRAV39-201ENST00000390466 ATF4P18848 351 aaPredicted RBP3.26□□□□□ -1.89
TRAV39-201ENST00000390466 ELK1P19419 428 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms