RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 HMGN2P05204 90 aaKnown RBP12.77□□□□□ -0.37
SEC13-203ENST00000383801 OR12D1P0DN82 309 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 NR2F1P10589 423 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 CPMP14384 443 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 PVRP15151 417 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 PNLIPP16233 465 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 AQP1P29972 269 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 RYKP34925 604 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 FEN1P39748 380 aaKnown RBP12.77□□□□□ -0.37
SEC13-203ENST00000383801 CTSKP43235 329 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 KCNJ5P48544 419 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 VSX2P58304 361 aaPredicted RBP12.77□□□□□ -0.37
SEC13-203ENST00000383801 KEAP1Q14145 624 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 ATAD3BQ5T9A4 648 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 AP1ARQ63HQ0 302 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 FAM180BQ6P0A1 224 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 TNFAIP8L2Q6P589 184 aaPredicted RBP12.77□□□□□ -0.37
SEC13-203ENST00000383801 TTC33Q6PID6 262 aaPredicted RBP12.77□□□□□ -0.37
SEC13-203ENST00000383801 MED25Q71SY5 747 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 KMT5CQ86Y97 462 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 PLXDC1Q8IUK5 500 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 OR2L13Q8N349 312 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 SETD9Q8NE22 299 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 PIK3C3Q8NEB9 887 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 ZCCHC10Q8TBK6 192 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 ADAMTS16Q8TE57 1224 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 XAGE5Q8WWM1 108 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 PROX1Q92786 737 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 ZNF354BQ96LW1 612 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 TRNT1Q96Q11 434 aaKnown RBP12.77□□□□□ -0.37
SEC13-203ENST00000383801 DUSP23Q9BVJ7 150 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 PDE7BQ9NP56 450 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 PRMT8Q9NR22 394 aaPredicted RBP12.77□□□□□ -0.37
SEC13-203ENST00000383801 MRPS33Q9Y291 106 aaKnown RBP12.77□□□□□ -0.37
SEC13-203ENST00000383801 NAALAD2Q9Y3Q0 740 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 ENPP4Q9Y6X5 453 aa12.77□□□□□ -0.37
SEC13-203ENST00000383801 LOC100130705A0A1B0GUX0 176 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 FITM1A5D6W6 292 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 SLC9B1P1A6NJY1 282 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 hCG_2039718K7EN88 272 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 TNFRSF11BO00300 401 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 HS6ST1O60243 411 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 PLOD3O60568 738 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 NSA2O95478 260 aaKnown RBP12.76□□□□□ -0.37
SEC13-203ENST00000383801 ZBTB11O95625 1053 aaPredicted RBP12.76□□□□□ -0.37
SEC13-203ENST00000383801 STATHP02808 62 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 FESP07332 822 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 MSL3P1P0C860 447 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 XCR1P46094 333 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 MAN2A2P49641 1150 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 NR1H2P55055 460 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 SIGLEC14Q08ET2 396 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 TOP3AQ13472 1001 aaPredicted RBP12.76□□□□□ -0.37
SEC13-203ENST00000383801 LYSMD4Q5XG99 296 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 CDC73Q6P1J9 531 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 FAHD1Q6P587 224 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 FAM92BQ6ZTR7 304 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 THAP5Q7Z6K1 395 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 TMEM179BQ7Z7N9 219 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 CYP4Z1Q86W10 505 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 SFTPA2Q8IWL1 248 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 C8orf59Q8N0T1 100 aaPredicted RBP12.76□□□□□ -0.37
SEC13-203ENST00000383801 CA13Q8N1Q1 262 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 LINC00471Q8N535 108 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 MS4A4EQ96PG1 132 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 ELF4Q99607 663 aaPredicted RBP12.76□□□□□ -0.37
SEC13-203ENST00000383801 PIP5K1AQ99755 562 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 MAP3K3Q99759 626 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 TREX2Q9BQ50 279 aaPredicted RBP12.76□□□□□ -0.37
SEC13-203ENST00000383801 TOR3AQ9H497 397 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 EVA1AQ9H8M9 152 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 FAM60AQ9NP50 221 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 PDP1Q9P0J1 537 aaPredicted RBP12.76□□□□□ -0.37
SEC13-203ENST00000383801 LRIT1Q9P2V4 623 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 TRPC4Q9UBN4 977 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 SEC14L3Q9UDX4 400 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 TMEFF2Q9UIK5 374 aaPredicted RBP12.76□□□□□ -0.37
SEC13-203ENST00000383801 C19orf53Q9UNZ5 99 aaPredicted RBP12.76□□□□□ -0.37
SEC13-203ENST00000383801 SNX11Q9Y5W9 270 aa12.76□□□□□ -0.37
SEC13-203ENST00000383801 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 A0A087WXM4 84 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 TRIM64CA6NLI5 447 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 H0YIG0 161 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 SYT5O00445 386 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 SLC28A2O43868 658 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 AK1P00568 194 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 GUSBP08236 651 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 PABPC4LP0CB38 370 aaKnown RBP12.75□□□□□ -0.37
SEC13-203ENST00000383801 SLC35E2P0CK97 266 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 CD247P20963 164 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 IGFBP5P24593 272 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 RRM2P31350 389 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 GABRA4P48169 554 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 IST1P53990 364 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 SQSTM1Q13501 440 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 APOFQ13790 326 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 LASP1Q14847 261 aaKnown RBP12.75□□□□□ -0.37
SEC13-203ENST00000383801 MAPK11Q15759 364 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 DUSP7Q16829 419 aa12.75□□□□□ -0.37
SEC13-203ENST00000383801 DEFB133Q30KQ1 61 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms