RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 GGT3PA6NGU5 568 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 M0R129 80 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 NAT1P18440 290 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 CHATP28329 748 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 RARRES1P49788 294 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 CRISP3P54108 245 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 GP2P55259 537 aaKnown RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 TAS2R19P59542 299 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 AP5B1Q2VPB7 878 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 C2orf27AQ580R0 203 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 MON1AQ86VX9 555 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 AMIGO1Q86WK6 493 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 SLC15A4Q8N697 577 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 RSPRY1Q96DX4 576 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 CNTNAP3BQ96NU0 1288 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 LYSMD1Q96S90 227 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 ARHGAP39Q9C0H5 1083 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 NOX3Q9HBY0 568 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 ASB6Q9NWX5 421 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 SPANXCQ9NY87 97 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 KLHL9Q9P2J3 617 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 PCDHB10Q9UN67 800 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 COLEC10Q9Y6Z7 277 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 A0A0G2JMP0 313 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 MEIOCA2RUB1 952 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 SLC33A1O00400 549 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 KCNJ13O60928 360 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 SLC25A12O75746 678 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 JMJD7P0C870 316 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 VEGFBP49765 207 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 ZNF280AP59817 542 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 VLDLRP98155 873 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 DUSP4Q13115 394 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 CSHL1Q14406 222 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 USF2Q15853 346 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 SNAPC1Q16533 368 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 RABEPKQ7Z6M1 372 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 ZFAND4Q86XD8 727 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 OR4M2Q8NGB6 313 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 C3orf49Q96BT1 292 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 KLHL5Q96PQ7 755 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 DPEP2Q9H4A9 486 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 SLC45A1Q9Y2W3 748 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 CACNG2Q9Y698 323 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 TTC24A2A3L6 582 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 ANXA2P2A6NMY6 339 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 BUD23O43709 281 aaKnown RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 OR5F1O95221 314 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 SCG5P05408 212 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 ANXA2P07355 339 aaKnown RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 EBLN1P0CF75 366 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 MYCLP1P12525 358 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 ALAS2P22557 587 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 PDHA2P29803 388 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 ZNF81P51508 661 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 CDKL1Q00532 357 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 TPGS2Q68CL5 300 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 METTL8Q9H825 291 aaKnown RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 CRTAC1Q9NQ79 661 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 C2CD4BA6NLJ0 364 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 PPP5D1E7EU14 171 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 TNFRSF10BO14763 440 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 H2AFB2P0C5Z0 115 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 FGF3P11487 239 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 RAB13P51153 203 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 REEP3Q6NUK4 255 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 RTL4Q6ZR62 310 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 B3GNT7Q8NFL0 401 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 OR10H5Q8NGA6 315 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 SFXN5Q8TD22 340 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 SLAMF9Q96A28 289 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 JSRP1Q96MG2 331 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 FCRL3Q96P31 734 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 CSPG4P5Q96PW8 444 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 C1QTNF3Q9BXJ4 246 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 GHRLQ9UBU3 117 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 OR12D3Q9UGF7 316 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 FARSAQ9Y285 508 aaKnown RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 ABCA4P78363 2273 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 DOCK5Q9H7D0 1870 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 A0A1B0GUH1 482 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 TP73O15350 636 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 ZNF208O43345 1280 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 SCO2O43819 266 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 MICAL2O94851 1124 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 RPP14O95059 124 aaKnown RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 SMPD1P17405 629 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 GADD45AP24522 165 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 ETV5P41161 510 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 GRM5P41594 1212 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 CTSOP43234 321 aaPredicted RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 NUDT6P53370 316 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 E2F1Q01094 437 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 IRF8Q02556 426 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 RBMS2Q15434 407 aaKnown RBP4.68□□□□□ -1.66
PTPRD-203ENST00000381196 FGD3Q5JSP0 725 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 H3F3CQ6NXT2 135 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 FAM171BQ6P995 826 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 FAM183BPQ6ZVS7 135 aa4.68□□□□□ -1.66
PTPRD-203ENST00000381196 OR10Z1Q8NGY1 313 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms