RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 TRIB1Q96RU8 372 aa21.19■□□□□ 0.98
U2AF1-202ENST00000380276 ATOH8Q96SQ7 321 aa21.19■□□□□ 0.98
U2AF1-202ENST00000380276 NAPGQ99747 312 aaPredicted RBP21.19■□□□□ 0.98
U2AF1-202ENST00000380276 SH3GL2Q99962 352 aa21.19■□□□□ 0.98
U2AF1-202ENST00000380276 EPB41L4BQ9H329 900 aa21.19■□□□□ 0.98
U2AF1-202ENST00000380276 SLC6A5Q9Y345 797 aa21.19■□□□□ 0.98
U2AF1-202ENST00000380276 PCDHGA11Q9Y5H2 935 aa21.19■□□□□ 0.98
U2AF1-202ENST00000380276 MTORP42345 2549 aa21.18■□□□□ 0.98
U2AF1-202ENST00000380276 EEF1E1-BLOC1S5C9J1V9 151 aa21.18■□□□□ 0.98
U2AF1-202ENST00000380276 EEF1E1O43324 174 aaKnown RBP21.18■□□□□ 0.98
U2AF1-202ENST00000380276 LTA4HP09960 611 aaKnown RBP21.18■□□□□ 0.98
U2AF1-202ENST00000380276 FAM58BPP0C7Q3 252 aa21.18■□□□□ 0.98
U2AF1-202ENST00000380276 GFAPP14136 432 aa21.18■□□□□ 0.98
U2AF1-202ENST00000380276 SSTR4P31391 388 aa21.18■□□□□ 0.98
U2AF1-202ENST00000380276 PIK3CBP42338 1070 aa21.18■□□□□ 0.98
U2AF1-202ENST00000380276 AGFG1P52594 562 aaKnown RBP21.18■□□□□ 0.98
U2AF1-202ENST00000380276 CRYZQ08257 329 aaKnown RBP21.18■□□□□ 0.98
U2AF1-202ENST00000380276 RPS6KA2Q15349 733 aa21.18■□□□□ 0.98
U2AF1-202ENST00000380276 C6orf163Q5TEZ5 329 aa21.18■□□□□ 0.98
U2AF1-202ENST00000380276 PRR22Q8IZ63 422 aa21.18■□□□□ 0.98
U2AF1-202ENST00000380276 RILPQ96NA2 401 aa21.18■□□□□ 0.98
U2AF1-202ENST00000380276 TIMP4Q99727 224 aa21.18■□□□□ 0.98
U2AF1-202ENST00000380276 GSX1Q9H4S2 264 aaPredicted RBP21.18■□□□□ 0.98
U2AF1-202ENST00000380276 SNX15Q9NRS6 342 aa21.18■□□□□ 0.98
U2AF1-202ENST00000380276 ITPR3Q14573 2671 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 A0A1W2PR48 441 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 TUBAL3A6NHL2 446 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 EIF3HO15372 352 aaKnown RBP eCLIP21.17■□□□□ 0.98
U2AF1-202ENST00000380276 TMPRSS11DO60235 418 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 TRIM3O75382 744 aaPredicted RBP21.17■□□□□ 0.98
U2AF1-202ENST00000380276 GBAP04062 536 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 SLC35E2BP0CK96 405 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 DRD2P14416 443 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 HOXB4P17483 251 aaPredicted RBP21.17■□□□□ 0.98
U2AF1-202ENST00000380276 KRT15P19012 456 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 PTX3P26022 381 aaPredicted RBP21.17■□□□□ 0.98
U2AF1-202ENST00000380276 CEACAM8P31997 349 aaPredicted RBP21.17■□□□□ 0.98
U2AF1-202ENST00000380276 TMED10P49755 219 aaKnown RBP21.17■□□□□ 0.98
U2AF1-202ENST00000380276 SF3B4Q15427 424 aaKnown RBP eCLIP21.17■□□□□ 0.98
U2AF1-202ENST00000380276 CPSF6Q16630 551 aaKnown RBP eCLIP21.17■□□□□ 0.98
U2AF1-202ENST00000380276 PACS2Q86VP3 889 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 CCDC25Q86WR0 208 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 UCN3Q969E3 161 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 NXNL1Q96CM4 212 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 REPS1Q96D71 796 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 ALPK1Q96QP1 1244 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 ZNF629Q9UEG4 869 aaPredicted RBP21.17■□□□□ 0.98
U2AF1-202ENST00000380276 FOXD3Q9UJU5 478 aaPredicted RBP21.17■□□□□ 0.98
U2AF1-202ENST00000380276 ASB4Q9Y574 426 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 NPFFR2Q9Y5X5 522 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 NINQ8N4C6 2090 aa21.17■□□□□ 0.98
U2AF1-202ENST00000380276 SYCE1LA8MT33 242 aa21.16■□□□□ 0.98
U2AF1-202ENST00000380276 GNB5O14775 395 aa21.16■□□□□ 0.98
U2AF1-202ENST00000380276 AIFM1O95831 613 aa21.16■□□□□ 0.98
U2AF1-202ENST00000380276 CRABP2P29373 138 aa21.16■□□□□ 0.98
U2AF1-202ENST00000380276 TIMP3P35625 211 aa21.16■□□□□ 0.98
U2AF1-202ENST00000380276 ZNF136P52737 540 aa21.16■□□□□ 0.98
U2AF1-202ENST00000380276 NRG3P56975 720 aa21.16■□□□□ 0.98
U2AF1-202ENST00000380276 RPP38P78345 283 aaKnown RBP21.16■□□□□ 0.98
U2AF1-202ENST00000380276 KEAP1Q14145 624 aa21.16■□□□□ 0.98
U2AF1-202ENST00000380276 KBTBD12Q3ZCT8 623 aa21.16■□□□□ 0.98
U2AF1-202ENST00000380276 LIPJQ5W064 366 aa21.16■□□□□ 0.98
U2AF1-202ENST00000380276 PAMR1Q6UXH9 720 aa21.16■□□□□ 0.98
U2AF1-202ENST00000380276 MMP21Q8N119 569 aa21.16■□□□□ 0.98
U2AF1-202ENST00000380276 SPPL2AQ8TCT8 520 aa21.16■□□□□ 0.98
U2AF1-202ENST00000380276 KCTD4Q8WVF5 259 aa21.16■□□□□ 0.98
U2AF1-202ENST00000380276 GNRHR2Q96P88 292 aa21.16■□□□□ 0.98
U2AF1-202ENST00000380276 TEX10Q9NXF1 929 aaPredicted RBP21.16■□□□□ 0.98
U2AF1-202ENST00000380276 A0A0A6YYD5 115 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 SNX4O95219 450 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 RAF1P04049 648 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 CLPSP04118 112 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 SLC35E2P0CK97 266 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 NT5EP21589 574 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 PIK3R1P27986 724 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 BSGP35613 385 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 CDK9P50750 372 aaKnown RBP21.15■□□□□ 0.98
U2AF1-202ENST00000380276 GPX6P59796 221 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 SETDB1Q15047 1291 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 PFKFB4Q16877 469 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 WIPI1Q5MNZ9 446 aaPredicted RBP21.15■□□□□ 0.98
U2AF1-202ENST00000380276 OR52E8Q6IFG1 317 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 CAMKMTQ7Z624 323 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 NUDT13Q86X67 352 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 KIF18BQ86Y91 864 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 GALNT12Q8IXK2 581 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 LINC01560Q8TB33 94 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 RYDENQ9NUL5 291 aaKnown RBP21.15■□□□□ 0.98
U2AF1-202ENST00000380276 WHRNQ9P202 907 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 C15orf41Q9Y2V0 281 aa21.15■□□□□ 0.98
U2AF1-202ENST00000380276 A0A1W2PS29 197 aa21.14■□□□□ 0.97
U2AF1-202ENST00000380276 ANKRD33BA6NCL7 494 aa21.14■□□□□ 0.97
U2AF1-202ENST00000380276 LRRC14BA6NHZ5 514 aa21.14■□□□□ 0.97
U2AF1-202ENST00000380276 GSTA2P09210 222 aa21.14■□□□□ 0.97
U2AF1-202ENST00000380276 PIK3CGP48736 1102 aa21.14■□□□□ 0.97
U2AF1-202ENST00000380276 NEK2P51955 445 aa21.14■□□□□ 0.97
U2AF1-202ENST00000380276 IRF9Q00978 393 aa21.14■□□□□ 0.97
U2AF1-202ENST00000380276 PCDH1Q08174 1060 aa21.14■□□□□ 0.97
U2AF1-202ENST00000380276 FBXL19-AS1Q494R0 122 aa21.14■□□□□ 0.97
U2AF1-202ENST00000380276 EIPR1Q53HC9 387 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms