RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 PRRG3Q9BZD7 231 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 OR51B6Q9H340 312 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 FOLH1BQ9HBA9 442 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 TAS2R9Q9NYW1 312 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 ZMIZ1Q9ULJ6 1067 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 POFUT2Q9Y2G5 429 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 KIAA1217Q5T5P2 1943 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 LOXHD1Q8IVV2 1947 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 ZNFX1Q9P2E3 1918 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 C2orf92A0A1B0GVN3 265 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 LOC730098B7Z3J9 87 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 IDH3BO43837 385 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 C1QAP02745 245 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 LINC00032P0C843 101 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 NAT1P18440 290 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 OGNP20774 298 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 PSMB9P28065 219 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 AQP1P29972 269 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 CLK1P49759 484 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 CDK9P50750 372 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 EEFSECP57772 596 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 TAS2R41P59536 307 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 PPP1R8Q12972 351 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 CSTF3Q12996 717 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 PAFAH1B3Q15102 231 aaKnown RBP6.22□□□□□ -1.41
NEDD9-202ENST00000379446 TCTN1Q2MV58 587 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 REP15Q6BDI9 236 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 SLC15A4Q8N697 577 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 TNIP2Q8NFZ5 429 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 TIMM29Q9BSF4 260 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 CHID1Q9BWS9 393 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 ACTL8Q9H568 366 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 OR6C2Q9NZP2 312 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 RAB26Q9ULW5 256 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 HS3ST2Q9Y278 367 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 TRAF6Q9Y4K3 522 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 B3GALT1Q9Y5Z6 326 aa6.22□□□□□ -1.41
NEDD9-202ENST00000379446 ESPL1Q14674 2120 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 LTBP1Q14766 1721 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 SNPHO15079 494 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 ADAM23O75077 832 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 SLC35E2BP0CK96 405 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 HNF1AP20823 631 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 PTX3P26022 381 aaPredicted RBP6.21□□□□□ -1.41
NEDD9-202ENST00000379446 PRDX6P30041 224 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 GCH1P30793 250 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 GDF5P43026 501 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 RPS18P62269 152 aaKnown RBP6.21□□□□□ -1.41
NEDD9-202ENST00000379446 PIGFQ07326 219 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 MAPK14Q16539 360 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 TIGD2Q4W5G0 525 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 PIWIL3Q7Z3Z3 882 aaKnown RBP6.21□□□□□ -1.41
NEDD9-202ENST00000379446 DNAAF1Q8NEP3 725 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 OR2AJ1Q8NGZ0 328 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 WFDC5Q8TCV5 224 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 FIG4Q92562 907 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 ZNF775Q96BV0 537 aaPredicted RBP6.21□□□□□ -1.41
NEDD9-202ENST00000379446 CEP19Q96LK0 163 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 GPR22Q99680 433 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 NANOGQ9H9S0 305 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 SLC6A20Q9NP91 592 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 SPAG4Q9NPE6 437 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 P4HTMQ9NXG6 502 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 KCMF1Q9P0J7 381 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 EIF3KQ9UBQ5 218 aaKnown RBP6.21□□□□□ -1.41
NEDD9-202ENST00000379446 TIMM22Q9Y584 194 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 CEPT1Q9Y6K0 416 aa6.21□□□□□ -1.41
NEDD9-202ENST00000379446 TNS1Q9HBL0 1735 aaKnown RBP6.21□□□□□ -1.41
NEDD9-202ENST00000379446 PCDH7O60245 1069 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 SRPX2O60687 465 aaPredicted RBP6.21□□□□□ -1.42
NEDD9-202ENST00000379446 SEMA3DO95025 777 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 SIX3O95343 332 aaPredicted RBP6.21□□□□□ -1.42
NEDD9-202ENST00000379446 SMIM18P0DKX4 95 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 NME1P15531 152 aaKnown RBP6.21□□□□□ -1.42
NEDD9-202ENST00000379446 ZNF823P16415 610 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 PSMA4P25789 261 aaKnown RBP6.21□□□□□ -1.42
NEDD9-202ENST00000379446 PTGS2P35354 604 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 MCCD1P59942 119 aaPredicted RBP6.21□□□□□ -1.42
NEDD9-202ENST00000379446 EEF1A1P68104 462 aaKnown RBP6.21□□□□□ -1.42
NEDD9-202ENST00000379446 XIAPP98170 497 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 NRG1Q02297 640 aaPredicted RBP6.21□□□□□ -1.42
NEDD9-202ENST00000379446 MERTKQ12866 999 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 SERTAD2Q14140 314 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 RFTN2Q52LD8 501 aaPredicted RBP6.21□□□□□ -1.42
NEDD9-202ENST00000379446 SAMD4BQ5PRF9 694 aaKnown RBP6.21□□□□□ -1.42
NEDD9-202ENST00000379446 UBE2UQ5VVX9 321 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 CARD17Q5XLA6 110 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 TMEM211Q6ICI0 200 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 IQCHQ86VS3 1027 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 SPPL2CQ8IUH8 684 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 GALNT16Q8N428 558 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 DHRSXQ8N5I4 330 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 GPBAR1Q8TDU6 330 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 FBXL20Q96IG2 436 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 MACROD1Q9BQ69 325 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 RPF2Q9H7B2 306 aaKnown RBP6.21□□□□□ -1.42
NEDD9-202ENST00000379446 CD320Q9NPF0 282 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 BRD7Q9NPI1 651 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 CTPS2Q9NRF8 586 aa6.21□□□□□ -1.42
NEDD9-202ENST00000379446 GLS2Q9UI32 602 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms