RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 TPGS2Q68CL5 300 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 DEFB128Q7Z7B8 93 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 ZER1Q7Z7L7 766 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 METTL3Q86U44 580 aaKnown RBP17.05■□□□□ 0.32
GNE-201ENST00000377902 ZNF557Q8N988 423 aaPredicted RBP17.05■□□□□ 0.32
GNE-201ENST00000377902 GLYATL1Q969I3 302 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 ZBED6CLQ96FA7 236 aaPredicted RBP17.05■□□□□ 0.32
GNE-201ENST00000377902 PLA2G12AQ9BZM1 189 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 TESQ9UGI8 421 aaKnown RBP17.05■□□□□ 0.32
GNE-201ENST00000377902 SLC25A13Q9UJS0 675 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 HMGN4O00479 90 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 RAB36O95755 333 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 CTSLP07711 333 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 TIMP2P16035 220 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 CA8P35219 290 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 SLC9A3P48764 834 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 PRLHRP49683 370 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 RAB25P57735 213 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 QPRTQ15274 297 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 TMEM215Q68D42 235 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 LAPTM4BQ86VI4 370 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 TRAM1L1Q8N609 369 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 KCTD7Q96MP8 289 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 EGLN3Q9H6Z9 239 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 KCNK12Q9HB15 430 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 NLKQ9UBE8 527 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 A4GNTQ9UNA3 340 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 ALG5Q9Y673 324 aa17.05■□□□□ 0.32
GNE-201ENST00000377902 FAAHO00519 579 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 EPHX1P07099 455 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 TRAPPC2P0DI81 140 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 TRAPPC2BP0DI82 140 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 GNG2P59768 71 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 GPR19Q15760 415 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 MPP7Q5T2T1 576 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 C6orf120Q7Z4R8 191 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 TECPR1Q7Z6L1 1165 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 KLHDC8AQ8IYD2 350 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 CPXM2Q8N436 756 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 GDPD1Q8N9F7 314 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 SLC5A11Q8WWX8 675 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 SLC9A6Q92581 669 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 GFM1Q96RP9 751 aaKnown RBP17.04■□□□□ 0.32
GNE-201ENST00000377902 SERHL2Q9H4I8 314 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 TRPV5Q9NQA5 729 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 SEC14L3Q9UDX4 400 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 DIMT1Q9UNQ2 313 aaKnown RBP17.04■□□□□ 0.32
GNE-201ENST00000377902 A0A0C4DFX4 3053 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 K7ESM1 405 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 TBX6O95947 436 aaPredicted RBP17.04■□□□□ 0.32
GNE-201ENST00000377902 SOD2P04179 222 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 GAS1P54826 345 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 MAP4K2Q12851 820 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 FAPQ12884 760 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 OCLNQ16625 522 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 ZNF284Q2VY69 593 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 ZNF628Q5EBL2 1059 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 TYW3Q6IPR3 259 aaKnown RBP17.04■□□□□ 0.32
GNE-201ENST00000377902 CNIH2Q6PI25 160 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 NXPE4Q6UWF7 544 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 UNC5DQ6UXZ4 953 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 IQCHQ86VS3 1027 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 CLDN22Q8N7P3 220 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 EXOSC8Q96B26 276 aaKnown RBP17.04■□□□□ 0.32
GNE-201ENST00000377902 SF3B6Q9Y3B4 125 aaKnown RBP17.04■□□□□ 0.32
GNE-201ENST00000377902 OBSL1O75147 1896 aa17.04■□□□□ 0.32
GNE-201ENST00000377902 PLPP1O14494 284 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 LALBAP00709 142 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 SLC2A2P11168 524 aaPredicted RBP17.03■□□□□ 0.32
GNE-201ENST00000377902 WEE1P30291 646 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 MLLT3P42568 568 aaPredicted RBP17.03■□□□□ 0.32
GNE-201ENST00000377902 GIPRP48546 466 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 SNAPC1Q16533 368 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 SPDYE7PQ495Y7 208 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 HIST2H2AA3Q6FI13 130 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 PLET1Q6UQ28 207 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 LHFPL3Q86UP9 236 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 Q8N402 240 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 DTX3Q8N9I9 347 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 SNAPC3Q92966 411 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 AP2M1Q96CW1 435 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 NEURL3Q96EH8 262 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 ZNF354BQ96LW1 612 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 RIPOR3Q96MK2 946 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 F2RL3Q96RI0 385 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 ZSCAN5AQ9BUG6 496 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 EFCAB11Q9BUY7 163 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 FBXW2Q9UKT8 454 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 SHISA3A0PJX4 238 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 GRM6O15303 877 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 SLC28A2O43868 658 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 SRPRAP08240 638 aaKnown RBP17.03■□□□□ 0.32
GNE-201ENST00000377902 ZNF30P17039 623 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 ALAS2P22557 587 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 KCNJ5P48544 419 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 DBPQ10586 325 aaPredicted RBP17.03■□□□□ 0.32
GNE-201ENST00000377902 GPR162Q16538 588 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 B3GLCTQ6Y288 498 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 ZNF730Q6ZMV8 503 aa17.03■□□□□ 0.32
GNE-201ENST00000377902 PRR23CQ6ZRP0 262 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms