RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 NDUFV2P19404 249 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 RAB2AP61019 212 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 PON3Q15166 354 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 UGT8Q16880 541 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 FAM69AQ5T7M9 428 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 Q6ZVU0 165 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 NRARPQ7Z6K4 114 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 ACBD7Q8N6N7 88 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 SH3RF2Q8TEC5 729 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 SNAPC3Q92966 411 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 COQ8BQ96D53 544 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 SLC35C2Q9NQQ7 365 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 GNG8Q9UK08 70 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 NUP50Q9UKX7 468 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 MAFFQ9ULX9 164 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 CASC3O15234 703 aaKnown RBP8.36□□□□□ -1.07
PCDH9-202ENST00000377865 POP7O75817 140 aaKnown RBP8.36□□□□□ -1.07
PCDH9-202ENST00000377865 PTPN2P17706 415 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 ADAM8P78325 824 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 LMAN2Q12907 356 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 WDR45BQ5MNZ6 344 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 COMMD6Q7Z4G1 85 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 FAM129CQ86XR2 697 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 SDR16C5Q8N3Y7 309 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 CPA6Q8N4T0 437 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 ANKK1Q8NFD2 765 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 SLC22A18Q96BI1 424 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 DEC1Q9P2X7 70 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 MGAT4CQ9UBM8 478 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 ACSL6Q9UKU0 697 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 NDRG4Q9ULP0 352 aaKnown RBP8.36□□□□□ -1.07
PCDH9-202ENST00000377865 FUT4P22083 530 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 UQCRC1P31930 480 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 SPINT3P49223 89 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 EMP3P54852 163 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 SNRPD2P62316 118 aaKnown RBP8.36□□□□□ -1.07
PCDH9-202ENST00000377865 BCL2L15Q5TBC7 163 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 CRTC1Q6UUV9 634 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 SUSD1Q6UWL2 747 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 LHFPL3Q86UP9 236 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 KAT2AQ92830 837 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 TEX37Q96LM6 180 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 OR2M2Q96R28 347 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 PINK1Q9BXM7 581 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 TRIM2Q9C040 744 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 DUSP21Q9H596 190 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 TRPV4Q9HBA0 871 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 NUDT15Q9NV35 164 aa8.36□□□□□ -1.07
PCDH9-202ENST00000377865 RGS17Q9UGC6 210 aaPredicted RBP8.36□□□□□ -1.07
PCDH9-202ENST00000377865 ANKRD34BA5PLL1 514 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 SOCS7O14512 581 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 GNB5O14775 395 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 ACP2P11117 423 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 TNFRSF1BP20333 461 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 MLLT10P55197 1068 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 KLHL24Q6TFL4 600 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF280BQ86YH2 543 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 CELF2-AS1Q8N7Q2 184 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 YIPF7Q8N8F6 280 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 OR4K5Q8NGD3 323 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 TMEM163Q8TC26 289 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 SCGB3A2Q96PL1 93 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 EXO5Q9H790 373 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 RRAGCQ9HB90 399 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 RANGRFQ9HD47 186 aaPredicted RBP8.35□□□□□ -1.07
PCDH9-202ENST00000377865 IL26Q9NPH9 171 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 IGLV3-10A0A075B6K4 115 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 GABRR3A8MPY1 467 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 CREBL2O60519 120 aaPredicted RBP8.35□□□□□ -1.07
PCDH9-202ENST00000377865 SLC43A1O75387 559 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 ALX3O95076 343 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 HTR1AP08908 422 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 MTHFD2P13995 350 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 NDUFS1P28331 727 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 PKLRP30613 574 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 LIPAP38571 399 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 FGL1Q08830 312 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 SNTA1Q13424 505 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 TATDN3Q17R31 274 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 TMEM35AQ53FP2 167 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 METTL11BQ5VVY1 283 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 CREB3L2Q70SY1 520 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 CEP68Q76N32 757 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 NRROSQ86YC3 692 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 COQ8AQ8NI60 647 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF461Q8TAF7 563 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 THAP6Q8TBB0 222 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 SLC7A13Q8TCU3 470 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 HS6ST2Q96MM7 605 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 P2RY13Q9BPV8 354 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 NEURL2Q9BR09 285 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 MRI1Q9BV20 369 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 TRMT61BQ9BVS5 477 aaKnown RBP8.35□□□□□ -1.07
PCDH9-202ENST00000377865 DMRT3Q9NQL9 472 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 SBF2Q86WG5 1849 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 TTC34A8MYJ7 566 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 DISC1C4P0D8 188 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF432O94892 652 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 PTHP01270 115 aa8.35□□□□□ -1.07
PCDH9-202ENST00000377865 ZNF865P0CJ78 1059 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms