RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 A0A0J9YY10 115 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 hCG_1807616A0A1W2PRN6 198 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 CER1O95813 267 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 CERS1P27544 350 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 GRK5P34947 590 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 GMPRP36959 345 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 RPL13AP3Q6NVV1 102 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 DPPA4Q7L190 304 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 SLC44A3Q8N4M1 653 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 INO80EQ8NBZ0 244 aaPredicted RBP12.99□□□□□ -0.33
GPC6-201ENST00000377047 ABHD5Q8WTS1 349 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 HS6ST2Q96MM7 605 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 TOX2Q96NM4 488 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 TMEM121BQ9BXQ6 578 aaPredicted RBP12.99□□□□□ -0.33
GPC6-201ENST00000377047 FN3KQ9H479 309 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 ZNF334Q9HCZ1 680 aaPredicted RBP12.99□□□□□ -0.33
GPC6-201ENST00000377047 NFS1Q9Y697 457 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 KDM3BQ7LBC6 1761 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 APOL3O95236 402 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 PLATP00750 562 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 IL4RP24394 825 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 CD68P34810 354 aaPredicted RBP12.99□□□□□ -0.33
GPC6-201ENST00000377047 ARG2P78540 354 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 SHISA6Q6ZSJ9 500 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 PTRH2Q9Y3E5 179 aaKnown RBP12.99□□□□□ -0.33
GPC6-201ENST00000377047 ZSCAN5BA6NJL1 495 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 TMEM189-UBE2V1I3L0A0 370 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 TYROBPO43914 113 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 PVALBP20472 110 aaPredicted RBP12.99□□□□□ -0.33
GPC6-201ENST00000377047 CLDN10P78369 228 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 CLCA4Q14CN2 919 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 GRHL2Q6ISB3 625 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 KLHDC10Q6PID8 442 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 SLC12A9Q9BXP2 914 aa12.99□□□□□ -0.33
GPC6-201ENST00000377047 SOX30O94993 753 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 GPR4P46093 362 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 SLC36A3Q495N2 470 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 MEDAGQ5VYS4 303 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 LRFN4Q6PJG9 635 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 PARS2Q7L3T8 475 aaKnown RBP12.98□□□□□ -0.33
GPC6-201ENST00000377047 CITED4Q96RK1 184 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 ALOXE3Q9BYJ1 711 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 IL26Q9NPH9 171 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 C5AR2Q9P296 337 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 DHDHQ9UQ10 334 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 SGK494L7N484 410 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 ZNF35P13682 527 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 CST5P28325 142 aaPredicted RBP12.98□□□□□ -0.33
GPC6-201ENST00000377047 KANK2Q63ZY3 851 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 GTF2IRD2BQ6EKJ0 949 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 GTF2IRD2Q86UP8 949 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 PSD4Q8NDX1 1056 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 OR8S1Q8NH09 359 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 ZBED3Q96IU2 234 aaPredicted RBP12.98□□□□□ -0.33
GPC6-201ENST00000377047 NANSQ9NR45 359 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 KIF13AQ9H1H9 1805 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 HIDE1A8MVS5 230 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 ATE1O95260 518 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 DPP6P42658 865 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 CDK3Q00526 305 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 GLT8D1Q68CQ7 371 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 CLECL1Q8IZS7 167 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 CPXM2Q8N436 756 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 FUBP1Q96AE4 644 aaKnown RBP12.98□□□□□ -0.33
GPC6-201ENST00000377047 PITX2Q99697 317 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 EHD1Q9H4M9 534 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 KCMF1Q9P0J7 381 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 EPHA6Q9UF33 1036 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 CDH10Q9Y6N8 788 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 MYH6P13533 1939 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 C13orf42A0A1B0GVH6 325 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 EEDO75530 441 aaKnown RBP12.98□□□□□ -0.33
GPC6-201ENST00000377047 BPNT1O95861 308 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 RBM34P42696 430 aaKnown RBP12.98□□□□□ -0.33
GPC6-201ENST00000377047 SNU13P55769 128 aaKnown RBP12.98□□□□□ -0.33
GPC6-201ENST00000377047 MAZP56270 477 aaKnown RBP12.98□□□□□ -0.33
GPC6-201ENST00000377047 CDKN3Q16667 212 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 LRRC26Q2I0M4 334 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 STEAP4Q687X5 459 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 COMMD6Q7Z4G1 85 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 OR13C3Q8NGS6 347 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 TSPEARQ8WU66 669 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 THRSPQ92748 146 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 FBXL8Q96CD0 374 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 ZNF317Q96PQ6 595 aaPredicted RBP12.98□□□□□ -0.33
GPC6-201ENST00000377047 MYH11P35749 1972 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 DISC1C4P0D8 188 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 ZNF252P-AS1Q0IIN9 211 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 EEF1A1P5Q5VTE0 462 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 UNQ6126/PRO20091Q6UXV3 157 aa12.98□□□□□ -0.33
GPC6-201ENST00000377047 DNMT3BQ9UBC3 853 aaKnown RBP12.98□□□□□ -0.33
GPC6-201ENST00000377047 RBMX2Q9Y388 322 aaKnown RBP12.98□□□□□ -0.33
GPC6-201ENST00000377047 GJE1A6NN92 205 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 FLRT2O43155 660 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 MAOBP27338 520 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 GCGRP47871 477 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 FAM78AQ5JUQ0 283 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 PRR22Q8IZ63 422 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 OR6C4Q8NGE1 309 aa12.97□□□□□ -0.33
GPC6-201ENST00000377047 WDR20Q8TBZ3 569 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms