RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CRISP3P54108 245 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 PTGES3Q15185 160 aaKnown RBP19.09■□□□□ 0.65
VSX1-202ENST00000376709 TCTN3Q6NUS6 607 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 SLC48A1Q6P1K1 146 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 KLHL17Q6TDP4 642 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 TMEM64Q6YI46 380 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 P2RY8Q86VZ1 359 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 BMFQ96LC9 184 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 FCRL4Q96PJ5 515 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 YIPF4Q9BSR8 244 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 RSPO3Q9BXY4 272 aaPredicted RBP19.09■□□□□ 0.65
VSX1-202ENST00000376709 KCNK12Q9HB15 430 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 GIMAP4Q9NUV9 329 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 DUSP12Q9UNI6 340 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 CLPXO76031 633 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 ACVR2AP27037 513 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 TPMTP51580 245 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 MLLT10P55197 1068 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 CDC42P60953 191 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 MRPS21P82921 87 aaKnown RBP19.09■□□□□ 0.65
VSX1-202ENST00000376709 LASP1Q14847 261 aaKnown RBP19.09■□□□□ 0.65
VSX1-202ENST00000376709 TMEM107Q6UX40 140 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 RBM45Q8IUH3 476 aaKnown RBP19.09■□□□□ 0.65
VSX1-202ENST00000376709 SLC44A3Q8N4M1 653 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 DNAJC22Q8N4W6 341 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 SUN3Q8TAQ9 357 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 MYDGFQ969H8 173 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 SLC22A18Q96BI1 424 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 MAPKAP1Q9BPZ7 522 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 PLCXD1Q9NUJ7 323 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 PSORS1C1Q9UIG5 152 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 KLF15Q9UIH9 416 aa19.09■□□□□ 0.65
VSX1-202ENST00000376709 GPC6Q9Y625 555 aaPredicted RBP19.09■□□□□ 0.65
VSX1-202ENST00000376709 CLCA1A8K7I4 914 aa19.08■□□□□ 0.65
VSX1-202ENST00000376709 APBB3O95704 486 aa19.08■□□□□ 0.65
VSX1-202ENST00000376709 HMGN2P05204 90 aaKnown RBP19.08■□□□□ 0.65
VSX1-202ENST00000376709 NUDT6P53370 316 aa19.08■□□□□ 0.65
VSX1-202ENST00000376709 RPS15AP62244 130 aaKnown RBP19.08■□□□□ 0.65
VSX1-202ENST00000376709 BTN3A2P78410 334 aa19.08■□□□□ 0.65
VSX1-202ENST00000376709 TFF2Q03403 129 aa19.08■□□□□ 0.65
VSX1-202ENST00000376709 DCST1Q5T197 706 aa19.08■□□□□ 0.65
VSX1-202ENST00000376709 ZNF770Q6IQ21 691 aaPredicted RBP19.08■□□□□ 0.65
VSX1-202ENST00000376709 PAQR7Q86WK9 346 aa19.08■□□□□ 0.65
VSX1-202ENST00000376709 TRIM69Q86WT6 500 aa19.08■□□□□ 0.65
VSX1-202ENST00000376709 KCT2Q8NC54 265 aa19.08■□□□□ 0.65
VSX1-202ENST00000376709 SFXN5Q8TD22 340 aa19.08■□□□□ 0.65
VSX1-202ENST00000376709 SIGLEC11Q96RL6 698 aa19.08■□□□□ 0.65
VSX1-202ENST00000376709 BCL7BQ9BQE9 202 aa19.08■□□□□ 0.65
VSX1-202ENST00000376709 C8orf33Q9H7E9 229 aaPredicted RBP19.08■□□□□ 0.65
VSX1-202ENST00000376709 ZNF226Q9NYT6 803 aa19.08■□□□□ 0.65
VSX1-202ENST00000376709 LRRC72A6NJI9 287 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 SEMA7AO75326 666 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 LCKP06239 509 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 H1F0P07305 194 aaKnown RBP19.08■□□□□ 0.64
VSX1-202ENST00000376709 FHP07954 510 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 CSNK2A2P19784 350 aaPredicted RBP19.08■□□□□ 0.64
VSX1-202ENST00000376709 IGFBP4P22692 258 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 POU1F1P28069 291 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 MPIP34949 423 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 PRR5P85299 388 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 DUSP2Q05923 314 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 RGS1Q08116 209 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 TMED1Q13445 227 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 MOGQ16653 247 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 MLIPQ5VWP3 458 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 OR56A1Q8NGH5 318 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 FNDC8Q8TC99 324 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 YIPF6Q96EC8 236 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 TRPV5Q9NQA5 729 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 PCOLCE2Q9UKZ9 415 aa19.08■□□□□ 0.64
VSX1-202ENST00000376709 SCN3AQ9NY46 2000 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 M0R129 80 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 SLC22A1O15245 554 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 PROM1O43490 865 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 OR10H3O60404 316 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 F3P13726 295 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 ELAVL4P26378 380 aaKnown RBP19.07■□□□□ 0.64
VSX1-202ENST00000376709 C21orf33P30042 268 aaPredicted RBP19.07■□□□□ 0.64
VSX1-202ENST00000376709 LSM3P62310 102 aaKnown RBP19.07■□□□□ 0.64
VSX1-202ENST00000376709 GNA13Q14344 377 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 COL19A1Q14993 1142 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 ZNF829Q3KNS6 432 aaPredicted RBP19.07■□□□□ 0.64
VSX1-202ENST00000376709 TMEM236Q5W0B7 351 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 OLIG3Q7RTU3 272 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 OR4D11Q8NGI4 311 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 BBS10Q8TAM1 723 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 MOAP1Q96BY2 351 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 SPATA5L1Q9BVQ7 753 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 CES1P1Q9UKY3 287 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 ZNF780BQ9Y6R6 833 aa19.07■□□□□ 0.64
VSX1-202ENST00000376709 FANCMQ8IYD8 2048 aa19.06■□□□□ 0.64
VSX1-202ENST00000376709 A0A1W2PS29 197 aa19.06■□□□□ 0.64
VSX1-202ENST00000376709 TCRBV21S2A2A0A5A6 115 aa19.06■□□□□ 0.64
VSX1-202ENST00000376709 SH3PXD2BA1X283 911 aa19.06■□□□□ 0.64
VSX1-202ENST00000376709 OR2A25A4D2G3 310 aa19.06■□□□□ 0.64
VSX1-202ENST00000376709 MAGEB3O15480 346 aa19.06■□□□□ 0.64
VSX1-202ENST00000376709 UGT2B17O75795 530 aa19.06■□□□□ 0.64
VSX1-202ENST00000376709 ADAP00813 363 aa19.06■□□□□ 0.64
VSX1-202ENST00000376709 SLC35G6P0C7Q6 338 aa19.06■□□□□ 0.64
VSX1-202ENST00000376709 CHMP24386 653 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms