RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 STX16O14662 325 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 SMIM24O75264 130 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 GDF1P27539 372 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 BSGP35613 385 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 MASP1P48740 699 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 CCNG1P51959 295 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 KRTAP10-9P60411 292 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 ETF1P62495 437 aaKnown RBP13.57□□□□□ -0.24
HDAC6-204ENST00000376643 IFT88Q13099 833 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 UAP1Q16222 522 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-204ENST00000376643 C8orf74Q6P047 294 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 LYPD8Q6UX82 237 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 GOLGA7Q7Z5G4 137 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 WDR53Q7Z5U6 358 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-204ENST00000376643 LACC1Q8IV20 430 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 CNPY4Q8N129 248 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 OR10G3Q8NGC4 313 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 OR4K14Q8NGD5 310 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 SREK1Q8WXA9 508 aaKnown RBP13.57□□□□□ -0.24
HDAC6-204ENST00000376643 HSPBAP1Q96EW2 488 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 SORBS1Q9BX66 1292 aaKnown RBP13.57□□□□□ -0.24
HDAC6-204ENST00000376643 CPSF2Q9P2I0 782 aaKnown RBP13.57□□□□□ -0.24
HDAC6-204ENST00000376643 Q9UFV3 132 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 PSME2Q9UL46 239 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 PYCARDQ9ULZ3 195 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 DNAJC13O75165 2243 aa13.57□□□□□ -0.24
HDAC6-204ENST00000376643 ANKRD17O75179 2603 aaKnown RBP13.57□□□□□ -0.24
HDAC6-204ENST00000376643 C15orf38-AP3S2A0A0A6YYH1 394 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 A0A1W2PR48 441 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 ZNF354AO60765 605 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-204ENST00000376643 AIFM1O95831 613 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 INHBAP08476 426 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 COL6A2P12110 1019 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 NAGAP17050 411 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 CNTFP26441 200 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 SERPINB9P50453 376 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 NR0B1P51843 470 aaKnown RBP13.56□□□□□ -0.24
HDAC6-204ENST00000376643 GUCY2DQ02846 1103 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 FRG2Q64ET8 278 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 SCIMPQ6UWF3 145 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 ARSKQ6UWY0 536 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 ZNF572Q7Z3I7 529 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-204ENST00000376643 ULK2Q8IYT8 1036 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 CHDHQ8NE62 594 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-204ENST00000376643 WDR20Q8TBZ3 569 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 FRG2BQ96QU4 278 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 NTMT1Q9BV86 223 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 ZNF717Q9BY31 904 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-204ENST00000376643 VPS11Q9H270 941 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 ELOVL6Q9H5J4 265 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 CXorf21Q9HAI6 301 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 CNOT11Q9UKZ1 510 aaKnown RBP13.56□□□□□ -0.24
HDAC6-204ENST00000376643 NPFFR2Q9Y5X5 522 aa13.56□□□□□ -0.24
HDAC6-204ENST00000376643 INTS1Q8N201 2190 aaKnown RBP13.56□□□□□ -0.24
HDAC6-204ENST00000376643 LRRC3CA6NJW4 275 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 TMPRSS11DO60235 418 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 EEDO75530 441 aaKnown RBP13.55□□□□□ -0.24
HDAC6-204ENST00000376643 KRT38O76015 456 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 GOSR1O95249 250 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 IL2RAP01589 272 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 CELA3AP09093 270 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 TIMP3P35625 211 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 DEKP35659 375 aaKnown RBP13.55□□□□□ -0.24
HDAC6-204ENST00000376643 KIR2DL3P43628 341 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 ASCL1P50553 236 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 PSPHP78330 225 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 IRF9Q00978 393 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 FUT7Q11130 342 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 GGTA1PQ4G0N0 100 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 RTL6Q6ICC9 239 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 ADGRD1Q6QNK2 874 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 ZDHHC24Q6UX98 284 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 SPPL2AQ8TCT8 520 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 TRPC4APQ8TEL6 797 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 FAIM2Q9BWQ8 316 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 OR10A5Q9H207 317 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 ACSS3Q9H6R3 686 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 NOL11Q9H8H0 719 aaKnown RBP13.55□□□□□ -0.24
HDAC6-204ENST00000376643 SEMA4BQ9NPR2 832 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-204ENST00000376643 SPRR3Q9UBC9 169 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 ZNF629Q9UEG4 869 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-204ENST00000376643 NFU1Q9UMS0 254 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 SNX6Q9UNH7 406 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 L3MBTL1Q9Y468 752 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 POLQO75417 2590 aa13.55□□□□□ -0.24
HDAC6-204ENST00000376643 C2CD3Q4AC94 2353 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 C1orf226A1L170 272 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 GLOD5A6NK44 160 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 HRKO00198 91 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 TRIM3O75382 744 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-204ENST00000376643 TRAPPC6AO75865 159 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 EPPINO95925 133 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 OTCP00480 354 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 PORP16435 677 aaPredicted RBP13.54□□□□□ -0.24
HDAC6-204ENST00000376643 ENDOUP21128 410 aaKnown RBP13.54□□□□□ -0.24
HDAC6-204ENST00000376643 NT5EP21589 574 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 ART1P52961 327 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 MAPK12P53778 367 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 DCAF7P61962 342 aa13.54□□□□□ -0.24
HDAC6-204ENST00000376643 DUSP8Q13202 625 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms