RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 BCL2L14Q9BZR8 327 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 PPIL3Q9H2H8 161 aaKnown RBP8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 MUSKO15146 869 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 TSPAN3O60637 253 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 GINS1Q14691 196 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 MAPK14Q16539 360 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 NBPF12Q5TAG4 269 aaPredicted RBP8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 UBE2UQ5VVX9 321 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 TNFAIP8L2Q6P589 184 aaPredicted RBP8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 SMARCD3Q6STE5 483 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 TMEM102Q8N9M5 508 aaPredicted RBP8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 RAB7BQ96AH8 199 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 ZNF300Q96RE9 604 aaPredicted RBP8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 PEBP4Q96S96 227 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 HOXD1Q9GZZ0 328 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 Q9N2J8 555 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 SLC22A7Q9Y694 548 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 SPTAN1Q13813 2472 aaKnown RBP8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 FAM230AA0A1W2PPH8 454 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 MITFO75030 526 aaPredicted RBP8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 GPX3P22352 226 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 KCNA5P22460 613 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 VSX2P58304 361 aaPredicted RBP8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 SRPXP78539 464 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 SLBPQ14493 270 aaKnown RBP eCLIP8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 PAN2Q504Q3 1202 aaKnown RBP8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 ZNF529Q6P280 563 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 DHRS9Q9BPW9 319 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 GABARAPL1Q9H0R8 117 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 ERVK-18Q9QC07 812 aa8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 TIMM13Q9Y5L4 95 aaPredicted RBP8.44□□□□□ -1.06
SHROOM4-202ENST00000376020 GGT3PA6NGU5 568 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 ADAM12O43184 909 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 MRPL19P49406 292 aaKnown RBP8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 NUMBP49757 651 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 FBXL22Q6P050 247 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 TAPBPLQ9BX59 468 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 ELL3Q9HB65 397 aaPredicted RBP8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 PIRO00625 290 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 NDUFB5O43674 189 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 RAB3BP20337 219 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 GSG1LQ6UXU4 331 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 ZSCAN1Q8NBB4 408 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 ZFAND1Q8TCF1 268 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 ARNTL2Q8WYA1 636 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 SMAD5Q99717 465 aaKnown RBP8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 MRPS30Q9NP92 439 aaKnown RBP8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 THSD1Q9NS62 852 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 TREX1Q9NSU2 369 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 SCAMP2O15127 329 aaKnown RBP8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 GLP1RP43220 463 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 BAMBIQ13145 260 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 ATAD3CQ5T2N8 411 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 FIP1L1Q6UN15 594 aaKnown RBP8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 YIPF7Q8N8F6 280 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 SLC29A1Q99808 456 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 CDCA4Q9BXL8 241 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 PRODH2Q9UF12 536 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 TOR1AO14656 332 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 IMPA2O14732 288 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 LAG3P18627 525 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 FGL2Q14314 439 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 TARBP2Q15633 366 aaKnown RBP8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 RGL4Q8IZJ4 473 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 ZFP90Q8TF47 636 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 NME7Q9Y5B8 376 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 ARL5CA6NH57 179 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 EFCAB7A8K855 629 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 PDHXO00330 501 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 CSF3P09919 207 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 GCGRP47871 477 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 NUDT6P53370 316 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 ZNF155Q12901 538 aaPredicted RBP8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 C22orf42Q6IC83 251 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 ACBD4Q8NC06 268 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 RNF128Q8TEB7 428 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 EBPLQ9BY08 206 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 NMUR1Q9HB89 426 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 DNAJC27Q9NZQ0 273 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 TMEM221A6NGB7 291 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 PCDH1Q08174 1060 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 OCLNQ16625 522 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 EIF2S3LQ2VIR3 472 aaKnown RBP8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 BCL2L15Q5TBC7 163 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 SLC30A6Q6NXT4 461 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 FAM180AQ6UWF9 173 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 WDSUB1Q8N9V3 476 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 SUV39H2Q9H5I1 410 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 AGAP14A8MT82 685 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 CRTAPO75718 401 aaPredicted RBP8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 SULT1C4O75897 302 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 CHRNB1P11230 501 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 VEGFCP49767 419 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 TAS2R50P59544 299 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 BDH1Q02338 343 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 GANABQ14697 944 aaKnown RBP8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 MINDY4Q4G0A6 757 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 TXNRD3NBQ6F5E7 133 aa8.43□□□□□ -1.06
SHROOM4-202ENST00000376020 GPAT4Q86UL3 456 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms