RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 JRKO75564 520 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 TCEA1P23193 301 aaKnown RBP11.01□□□□□ -0.65
PTCH1-203ENST00000375274 PCGF2P35227 344 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 KCNC1P48547 511 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 SMN1Q16637 294 aaKnown RBP11.01□□□□□ -0.65
PTCH1-203ENST00000375274 NRROSQ86YC3 692 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 OR52P1PQ8NH57 321 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 TBC1D15Q8TC07 691 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ACOT12Q8WYK0 555 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 MSANTD3Q96H12 275 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ZNF486Q96H40 463 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-203ENST00000375274 MAELQ96JY0 434 aaKnown RBP11.01□□□□□ -0.65
PTCH1-203ENST00000375274 HSPA12BQ96MM6 686 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 OR4K3Q96R72 315 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 EPYCQ99645 322 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 FGF18O76093 207 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ATXN1LP0C7T5 689 aaKnown RBP11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ACTC1P68032 377 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ACTA1P68133 377 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 FAM180BQ6P0A1 224 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 FUNDC1Q8IVP5 155 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 REM2Q8IYK8 340 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-203ENST00000375274 VWA5B2Q8N398 1253 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 IQCF1Q8N6M8 205 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 METTL25Q8N6Q8 603 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ANKLE1Q8NAG6 615 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 PHOSPHO1Q8TCT1 267 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 NSMAFQ92636 917 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 HYLS1Q96M11 299 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 SMIM14Q96QK8 99 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 GPR52Q9Y2T5 361 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 C1orf226A1L170 272 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ZNF860A6NHJ4 632 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 CENPBD1B2RD01 187 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ITGAMP11215 1152 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 DRD2P14416 443 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 HOXD12P35452 270 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 HTR2BP41595 481 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 GSTM4Q03013 218 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 RASGEF1BQ0VAM2 473 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 PIN1Q13526 163 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ZNF791Q3KP31 576 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ERN2Q76MJ5 926 aaKnown RBP11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ZNF101Q8IZC7 436 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 SPERTQ8NA61 448 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 B3GNT7Q8NFL0 401 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 OR13F1Q8NGS4 319 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ZNF583Q96ND8 569 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 NUFIP1Q9UHK0 495 aaKnown RBP11.01□□□□□ -0.65
PTCH1-203ENST00000375274 MEMO1Q9Y316 297 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 INSL6Q9Y581 213 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 BACE2Q9Y5Z0 518 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 ARID1BQ8NFD5 2236 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-203ENST00000375274 NWD2Q9ULI1 1742 aa11.01□□□□□ -0.65
PTCH1-203ENST00000375274 NPIPB15A6NHN6 443 aaPredicted RBP11□□□□□ -0.65
PTCH1-203ENST00000375274 RHPN2P1A8MT19 583 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 SCDO00767 359 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 B4GALT2O60909 372 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 CD70P32970 193 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 RGRP47804 291 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 ALDH3B2P48448 385 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 RGS6P49758 472 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 PRMT2P55345 433 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 TBCEQ15813 527 aaPredicted RBP11□□□□□ -0.65
PTCH1-203ENST00000375274 TMEM17Q86X19 198 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 PLCZ1Q86YW0 608 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 FCAMRQ8WWV6 532 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 TRIB2Q92519 343 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 NT5C3BQ969T7 300 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 ACTR6Q9GZN1 396 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 CLMPQ9H6B4 373 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 GABRQQ9UN88 632 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 ALG5Q9Y673 324 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 A8MUA0 341 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 M0R129 80 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 VEGFDO43915 354 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 RBBP9O75884 186 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 CDK1P06493 297 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 PGAM2P15259 253 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 GPR4P46093 362 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 WNT4P56705 351 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 POU6F2P78424 691 aaPredicted RBP11□□□□□ -0.65
PTCH1-203ENST00000375274 RPL13AP3Q6NVV1 102 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 SHFQ7M4L6 423 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 GPR26Q8NDV2 337 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 CHPT1Q8WUD6 406 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 SORCS1Q8WY21 1168 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 RPL3LQ92901 407 aaKnown RBP11□□□□□ -0.65
PTCH1-203ENST00000375274 SCP2D1Q9UJQ7 156 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 PCDHGA2Q9Y5H1 932 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 ZSCAN5BA6NJL1 495 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 E2F3O00716 465 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 SMAD6O43541 496 aaKnown RBP11□□□□□ -0.65
PTCH1-203ENST00000375274 NAA10P41227 235 aaPredicted RBP11□□□□□ -0.65
PTCH1-203ENST00000375274 SNRPD2P62316 118 aaKnown RBP11□□□□□ -0.65
PTCH1-203ENST00000375274 HYAL2Q12891 473 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 TUBB3Q13509 450 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 FLYWCH1Q4VC44 716 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 LDLRAD1Q5T700 205 aa11□□□□□ -0.65
PTCH1-203ENST00000375274 CBLL1Q75N03 491 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms