RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 WASP42768 502 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 CLK3P49761 638 aaKnown RBP8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 CRYBA2P53672 197 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 SEC13P55735 322 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 ACTR1AP61163 376 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 COPZ1P61923 177 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 PSPHP78330 225 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 HPCAP84074 193 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 TNFRSF17Q02223 184 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 OCA2Q04671 838 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 HYAL2Q12891 473 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 NCF4Q15080 339 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 MEP1AQ16819 746 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC44A4Q53GD3 710 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 COX20Q5RI15 118 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 GARNL3Q5VVW2 1013 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 XAF1Q6GPH4 301 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 FRMPD2BQ6IN97 320 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 ADNP2Q6IQ32 1131 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 ARMC6Q6NXE6 501 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 MED25Q71SY5 747 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 CEP68Q76N32 757 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 RNF44Q7L0R7 432 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 TMEM179BQ7Z7N9 219 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 FAM124AQ86V42 546 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 RNF113BQ8IZP6 322 aaKnown RBP8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 LRRC25Q8N386 305 aaPredicted RBP8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 GALNT6Q8NCL4 622 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 OR8J1Q8NGP2 316 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 FAM110BQ8TC76 370 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF675Q8TD23 568 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC38A4Q969I6 547 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 BORCS5Q969J3 196 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 ELP4Q96EB1 424 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 VMP1Q96GC9 406 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 TMEM19Q96HH6 336 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 PRRC1Q96M27 445 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 COG8Q96MW5 612 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 COL21A1Q96P44 957 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 MS4A4EQ96PG1 132 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 OR2A5Q96R48 311 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 STACQ99469 402 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 MYOCQ99972 504 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 TREX2Q9BQ50 279 aaPredicted RBP8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 PELOQ9BRX2 385 aaKnown RBP8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 PHF7Q9BWX1 381 aaPredicted RBP8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 CDCA4Q9BXL8 241 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 UCK2Q9BZX2 261 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 RAB33BQ9H082 229 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 SYNDIG1Q9H7V2 258 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 KCNK12Q9HB15 430 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 PRDM8Q9NQV8 689 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 DUSP22Q9NRW4 184 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 MED17Q9NVC6 651 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 ACTR10Q9NZ32 417 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 TBC1D29Q9UFV1 150 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 MKLN1Q9UL63 735 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 PLAGL1Q9UM63 463 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 MRPS33Q9Y291 106 aaKnown RBP8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 DSPPQ9NZW4 1301 aa8.23□□□□□ -1.09
SNRNP40-202ENST00000373720 FEZF1A0PJY2 475 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 KRT87PA6NCN2 255 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 ZAR1LA6NP61 321 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 HAT1O14929 419 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 AXIN1O15169 862 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC28A2O43868 658 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 PLOD3O60568 738 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 CNOT3O75175 753 aaKnown RBP8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 UGT2B17O75795 530 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 GABARAPO95166 117 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 ATP1B1P05026 303 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 BCHEP06276 602 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF12P17014 697 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 ALOX12P18054 663 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 NDUFV2P19404 249 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 PCMT1P22061 227 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 PRKACGP22612 351 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 ELK4P28324 431 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 ALDH4A1P30038 563 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 UGT2B10P36537 528 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 LTBRP36941 435 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 MLLT3P42568 568 aaPredicted RBP8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 PLA2G16P53816 162 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 IST1P53990 364 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 CRISP1P54107 249 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 UGT2B15P54855 530 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 CDH12P55289 794 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 UBE2IP63279 158 aaKnown RBP8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 EMX1Q04741 257 aaPredicted RBP8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 ST3GAL3Q11203 375 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 LARS2Q15031 903 aaKnown RBP8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 ELOCQ15369 112 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 OCLNQ16625 522 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 DGUOKQ16854 277 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 FAM214AQ32MH5 1076 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 TMEM201Q5SNT2 666 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 FAM219BQ5XKK7 198 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF770Q6IQ21 691 aaPredicted RBP8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 HEPHL1Q6MZM0 1159 aa8.22□□□□□ -1.09
SNRNP40-202ENST00000373720 TCTN3Q6NUS6 607 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms