RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 IL1RL2Q9HB29 575 aa16.58■□□□□ 0.24
TRAPPC3-202ENST00000373162 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRAPPC3-202ENST00000373162 TUBA8Q9NY65 449 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC3-202ENST00000373162 ZNF639Q9UID6 485 aa16.58■□□□□ 0.24
TRAPPC3-202ENST00000373162 CNOT11Q9UKZ1 510 aaKnown RBP16.58■□□□□ 0.24
TRAPPC3-202ENST00000373162 SNX6Q9UNH7 406 aa16.58■□□□□ 0.24
TRAPPC3-202ENST00000373162 SLC12A4Q9UP95 1085 aa16.58■□□□□ 0.24
TRAPPC3-202ENST00000373162 LIPGQ9Y5X9 500 aa16.58■□□□□ 0.24
TRAPPC3-202ENST00000373162 PHF3Q92576 2039 aaKnown RBP16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 IQANK1A0A1B0GTG1 560 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 A0A1W2PPM1 405 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 SERTM1A2A2V5 107 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 LRRC3CA6NJW4 275 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 G3V2L1 256 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 HNRNPRO43390 633 aaKnown RBP16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 SHBGP04278 402 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 PYGBP11216 843 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 CPMP14384 443 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 CHN1P15882 459 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 PTGS2P35354 604 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 DNASE1L1P49184 302 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 PPIAP62937 165 aaKnown RBP16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 RAE1P78406 368 aaKnown RBP16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 RASA2Q15283 850 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 NTRK2Q16620 822 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 TTC19Q6DKK2 380 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 PAGE2Q7Z2X7 111 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 CD163Q86VB7 1156 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 TDRPQ86YL5 185 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 DND1Q8IYX4 353 aaKnown RBP16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 CNPY4Q8N129 248 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 FBXW8Q8N3Y1 598 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 SLC22A8Q8TCC7 542 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 CTHRC1Q96CG8 243 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 ZNF681Q96N22 645 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 SACM1LQ9NTJ5 587 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 AHSPQ9NZD4 102 aa16.57■□□□□ 0.24
TRAPPC3-202ENST00000373162 FAM166BA8MTA8 275 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 FOXO6A8MYZ6 492 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 C19orf84I3L1E1 186 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 GOLGA8RI6L899 631 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 PRRG2O14669 202 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 DYRK3O43781 588 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 OR10H2O60403 315 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 SUPT7LO94864 414 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 ATP1B1P05026 303 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 CELA3AP09093 270 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 TAC1P20366 129 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 PIGAP37287 484 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 ARL1P40616 181 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 MAPK12P53778 367 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 TRA2BP62995 288 aaKnown RBP16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 CSTF3Q12996 717 aaKnown RBP16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 PRICKLE4Q2TBC4 344 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 SGO1Q5FBB7 561 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 CCNYL2Q5T2Q4 361 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 ARHGAP11AQ6P4F7 1023 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 C3P1Q6ZMU1 363 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 TRILQ7L0X0 811 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 GALNT12Q8IXK2 581 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 FAM109AQ8N4B1 249 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 C1orf52Q8N6N3 182 aaKnown RBP16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 CDYL2Q8N8U2 506 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 C17orf47Q8NEP4 570 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 OR4K14Q8NGD5 310 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 TP53INP1Q96A56 240 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 MARVELD3Q96A59 401 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 TREX2Q9BQ50 279 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 ACPTQ9BZG2 426 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 ZNF703Q9H7S9 590 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 MAT2BQ9NZL9 334 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 DTX4Q9Y2E6 619 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 DCHS2Q6V1P9 2916 aa16.56■□□□□ 0.24
TRAPPC3-202ENST00000373162 PDZD2O15018 2839 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 ARHGAP10A1A4S6 786 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 C1orf226A1L170 272 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 UBFD1O14562 309 aaKnown RBP16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 PROCP04070 461 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 ENDOUP21128 410 aaKnown RBP16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 PIK3R1P27986 724 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 HTR1EP28566 365 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 MAGEA5P43359 124 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 XKP51811 444 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 SMSP52788 366 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 MAP4K2Q12851 820 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 LCP2Q13094 533 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 GPRIN3Q6ZVF9 776 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 SLC29A4Q7RTT9 530 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 SLC22A16Q86VW1 577 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 SLC22A9Q8IVM8 553 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 LRRC25Q8N386 305 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 RPRMLQ8N4K4 120 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 OR10G3Q8NGC4 313 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 CNRIP1Q96F85 164 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 DEFB127Q9H1M4 99 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 SIRT5Q9NXA8 310 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 HEY2Q9UBP5 337 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 VPS29Q9UBQ0 182 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 MCM8Q9UJA3 840 aa16.55■□□□□ 0.24
TRAPPC3-202ENST00000373162 PKDREJQ9NTG1 2253 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms