RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 MVB12BQ9H7P6 319 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 PRTFDC1Q9NRG1 225 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 MAGED1Q9Y5V3 778 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-203ENST00000372407 CITO14578 2027 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 K7ERQ8 282 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 RTCAO00442 366 aaKnown RBP10.92□□□□□ -0.66
PTPRF-203ENST00000372407 EEF1E1O43324 174 aaKnown RBP10.92□□□□□ -0.66
PTPRF-203ENST00000372407 NUAK1O60285 661 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 RFPL2O75678 378 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 LAMP1P11279 417 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 BPIP17213 487 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 UGT2B10P36537 528 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 CASRP41180 1078 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 NCS1P62166 190 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 FAM189BP81408 668 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 ZNF33BQ06732 778 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 RPA4Q13156 261 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 SLC39A5Q6ZMH5 540 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 ANKRD13BQ86YJ7 626 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 ANKLE1Q8NAG6 615 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 KLHDC7BQ96G42 594 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 SLC29A1Q99808 456 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 G6PC3Q9BUM1 346 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 ZNF471Q9BX82 626 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-203ENST00000372407 TP63Q9H3D4 680 aaPredicted RBP10.92□□□□□ -0.66
PTPRF-203ENST00000372407 GSTO2Q9H4Y5 243 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 METTL7AQ9H8H3 244 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 ACSL6Q9UKU0 697 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 BACE2Q9Y5Z0 518 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 GXYLT2A0PJZ3 443 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 ARHGEF15O94989 841 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 RHOP08100 348 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 ENDOUP21128 410 aaKnown RBP10.92□□□□□ -0.66
PTPRF-203ENST00000372407 GSTM4Q03013 218 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 PMS2P3Q13401 168 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 KCTD9Q7L273 389 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 HS3ST5Q8IZT8 346 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 DTWD1Q8N5C7 304 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 POGLUT1Q8NBL1 392 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 OR13J1Q8NGT2 312 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 ORAI3Q9BRQ5 295 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 MROQ9BYG7 248 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 IGSF5Q9NSI5 407 aa10.92□□□□□ -0.66
PTPRF-203ENST00000372407 TEX13CA0A0J9YWL9 993 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 A0A1B0GVC2 190 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 A6NHS1 94 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 TRIM64CA6NLI5 447 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 C2orf74A8MZ97 194 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 TNFRSF10BO14763 440 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 SCAMP2O15127 329 aaKnown RBP10.91□□□□□ -0.66
PTPRF-203ENST00000372407 MUSKO15146 869 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 LRRTM2O43300 516 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 RNF13O43567 381 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 HCRTR2O43614 444 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 VNN2O95498 520 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 AK1P00568 194 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 MTNR1AP48039 350 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 RPS26P62854 115 aaKnown RBP10.91□□□□□ -0.66
PTPRF-203ENST00000372407 RPS21P63220 83 aaKnown RBP10.91□□□□□ -0.66
PTPRF-203ENST00000372407 ZNF789Q5FWF6 425 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.91□□□□□ -0.66
PTPRF-203ENST00000372407 TMEM164Q5U3C3 297 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 SLC5A8Q8N695 610 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 ZNF565Q8N9K5 539 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 ABHD11Q8NFV4 315 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 TESCQ96BS2 214 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 PTCHD1Q96NR3 888 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 P2RY13Q9BPV8 354 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 SLC12A9Q9BXP2 914 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 RANBP3Q9H6Z4 567 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-203ENST00000372407 IL17CQ9P0M4 197 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 MAFFQ9ULX9 164 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 STUB1Q9UNE7 303 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 UBR3Q6ZT12 1888 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 UNC119BA6NIH7 251 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 BOLA2-SMG1P6H3BVE0 249 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 PCDH17O14917 1159 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 GPR143P51810 404 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 PROX2Q3B8N5 592 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 SPIN3Q5JUX0 258 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 TMEM69Q5SWH9 247 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 GALNT10Q86SR1 603 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 SNIP1Q8TAD8 396 aaKnown RBP10.91□□□□□ -0.66
PTPRF-203ENST00000372407 MMABQ96EY8 250 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-203ENST00000372407 CACNG6Q9BXT2 260 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 GSKIPQ9P0R6 139 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 TAF1P21675 1872 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 TNRC6CQ9HCJ0 1690 aaKnown RBP10.91□□□□□ -0.66
PTPRF-203ENST00000372407 N4BP2Q86UW6 1770 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-203ENST00000372407 C2orf78A6NCI8 922 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 OR5K4A6NMS3 321 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 ANHXE9PGG2 379 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 CBLP22681 906 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 OXTRP30559 389 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 NAA10P41227 235 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-203ENST00000372407 CDKL4Q5MAI5 379 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 ZNF648Q5T619 568 aaPredicted RBP10.91□□□□□ -0.66
PTPRF-203ENST00000372407 OR52E8Q6IFG1 317 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 GKN2Q86XP6 184 aa10.91□□□□□ -0.66
PTPRF-203ENST00000372407 KLBQ86Z14 1044 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms