RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 ERVK-18Q9QC07 812 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 TBC1D29Q9UFV1 150 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 C3orf18Q9UK00 162 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 WBP11Q9Y2W2 641 aaKnown RBP12.14□□□□□ -0.47
GPC3-201ENST00000370818 A0A0G2JN53 185 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 A0A0X1KG70 313 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 LRIT2A6NDA9 550 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 AP3D1O14617 1153 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 TBX19O60806 448 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 MITFO75030 526 aaPredicted RBP12.14□□□□□ -0.47
GPC3-201ENST00000370818 HOXC4P09017 264 aaPredicted RBP12.14□□□□□ -0.47
GPC3-201ENST00000370818 CCDC159P0C7I6 412 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 POLR2CP19387 275 aaPredicted RBP12.14□□□□□ -0.47
GPC3-201ENST00000370818 CHI3L1P36222 383 aaPredicted RBP12.14□□□□□ -0.47
GPC3-201ENST00000370818 BCL6P41182 706 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 OR3A3P47888 321 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 ITGA1P56199 1179 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 KIAA1024LP59773 190 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 MRPS21P82921 87 aaKnown RBP12.14□□□□□ -0.47
GPC3-201ENST00000370818 TFF2Q03403 129 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 KRR1Q13601 381 aaKnown RBP12.14□□□□□ -0.47
GPC3-201ENST00000370818 NXNL2Q5VZ03 156 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 IDO2Q6ZQW0 420 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 NUDT13Q86X67 352 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 UCN3Q969E3 161 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 RGMAQ96B86 450 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 BMFQ96LC9 184 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 NECTIN4Q96NY8 510 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 TTYH2Q9BSA4 534 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 DOHHQ9BU89 302 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 ZNF576Q9H609 170 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 DDX31Q9H8H2 851 aaKnown RBP12.14□□□□□ -0.47
GPC3-201ENST00000370818 EXD2Q9NVH0 621 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 NCKAP1Q9Y2A7 1128 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 PCDHGA10Q9Y5H3 936 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 AP1M2Q9Y6Q5 423 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 COL4A2P08572 1712 aa12.14□□□□□ -0.47
GPC3-201ENST00000370818 HEATR5BQ9P2D3 2071 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 LOC100130705A0A1B0GUX0 176 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 TRBC2A0A5B9 178 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 METTL15A6NJ78 407 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 A8MV72 311 aaPredicted RBP12.13□□□□□ -0.47
GPC3-201ENST00000370818 MYO1GB0I1T2 1018 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 STATHP02808 62 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 OPN1SWP03999 348 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 AK4P27144 223 aaPredicted RBP12.13□□□□□ -0.47
GPC3-201ENST00000370818 DNAJA1P31689 397 aaKnown RBP12.13□□□□□ -0.47
GPC3-201ENST00000370818 SOAT1P35610 550 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 ALDH9A1P49189 494 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 DAPP51397 102 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 SELENOWP63302 87 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 RBBP4Q09028 425 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 HYAL2Q12891 473 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 SCARB2Q14108 478 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 DGCR6Q14129 220 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 HEPACAMQ14CZ8 416 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 SUZ12Q15022 739 aaKnown RBP12.13□□□□□ -0.47
GPC3-201ENST00000370818 TRIM40Q6P9F5 258 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 ENPP7Q6UWV6 458 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 ZNF793Q6ZN11 406 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 PARP16Q8N5Y8 322 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 OR2L3Q8NG85 312 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 RPLP0P6Q8NHW5 317 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 NFKBIDQ8NI38 313 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 ZHX1-C8orf76Q96EF9 292 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 RNF170Q96K19 258 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 SYNPO2LQ9H987 977 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 MRPS30Q9NP92 439 aaKnown RBP12.13□□□□□ -0.47
GPC3-201ENST00000370818 RPRD1BQ9NQG5 326 aaKnown RBP12.13□□□□□ -0.47
GPC3-201ENST00000370818 ADAM29Q9UKF5 820 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 PRUNE2Q8WUY3 3088 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 A0A0A6YYD5 115 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 SHISA7A6NL88 538 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 FAM25AB3EWG3 89 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 FAM25CB3EWG5 89 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 FAM25GB3EWG6 89 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 C4orf51C9J302 202 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 SERPIND1P05546 499 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 DDX5P17844 614 aaKnown RBP12.13□□□□□ -0.47
GPC3-201ENST00000370818 ALOX12P18054 663 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 FPR1P21462 350 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 UQCRC2P22695 453 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 FRKP42685 505 aaPredicted RBP12.13□□□□□ -0.47
GPC3-201ENST00000370818 TPMTP51580 245 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 PCBP4P57723 403 aaKnown RBP12.13□□□□□ -0.47
GPC3-201ENST00000370818 CDK5R2Q13319 367 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 NFATC4Q14934 902 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 COL19A1Q14993 1142 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 ZIC1Q15915 447 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 ZC3H12BQ5HYM0 836 aaKnown RBP12.13□□□□□ -0.47
GPC3-201ENST00000370818 KDM4DQ6B0I6 523 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 OR4C11Q6IEV9 310 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 KIAA1324Q6UXG2 1013 aaKnown RBP12.13□□□□□ -0.47
GPC3-201ENST00000370818 OR5H6Q8NGV6 325 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 CCL4L1Q8NHW4 92 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 QRFPRQ96P65 431 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 MACROD1Q9BQ69 325 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 C17orf62Q9BQA9 187 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 KLHL31Q9H511 634 aa12.13□□□□□ -0.47
GPC3-201ENST00000370818 ATP13A2Q9NQ11 1180 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms