RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 LOC285095A0A1B0GVY8 99 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 FMO6PO60774 539 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 NDUFV2P19404 249 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 DRD5P21918 477 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 GPR4P46093 362 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 AIMP2Q13155 320 aaKnown RBP15.2■□□□□ 0.02
COL17A1-202ENST00000369733 SLC22A10Q63ZE4 541 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 MKRN2Q9H000 416 aaKnown RBP15.2■□□□□ 0.02
COL17A1-202ENST00000369733 ASB4Q9Y574 426 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 ZNF878C9JN71 531 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 LRRTM2O43300 516 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 KAT7O95251 611 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 SLC11A1P49279 550 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 FPGSQ05932 587 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 SNTA1Q13424 505 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 CAMKVQ8NCB2 501 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 AUTS2Q8WXX7 1259 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 GGHQ92820 318 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 PMM1Q92871 262 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 ZNF285Q96NJ3 590 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 TMEM175Q9BSA9 504 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 KCNK12Q9HB15 430 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 GRHPRQ9UBQ7 328 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 SLC22A31A6NKX4 558 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 RAB3BP20337 219 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 CHMP24386 653 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 EVI2BP34910 448 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 OR51A7Q8NH64 312 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 ADAMTS19Q8TE59 1207 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 GMLQ99445 158 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 CARS2Q9HA77 564 aaKnown RBP15.2■□□□□ 0.02
COL17A1-202ENST00000369733 GSKIPQ9P0R6 139 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 GPR19Q15760 415 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 RPL13AP3Q6NVV1 102 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 OVCA2Q8WZ82 227 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 DPEP2Q9H4A9 486 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 COPS7AQ9UBW8 275 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 POU2F3Q9UKI9 436 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 EDARQ9UNE0 448 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 DNMT3AQ9Y6K1 912 aaPredicted RBP15.2■□□□□ 0.02
COL17A1-202ENST00000369733 TRBV2A0A0J9YWF9 115 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 SDC1P18827 310 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 PITPNBP48739 271 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 PNLDC1Q8NA58 520 aaKnown RBP15.2■□□□□ 0.02
COL17A1-202ENST00000369733 TRMT10AQ8TBZ6 339 aaKnown RBP15.2■□□□□ 0.02
COL17A1-202ENST00000369733 FAM46AQ96IP4 442 aaKnown RBP15.2■□□□□ 0.02
COL17A1-202ENST00000369733 ATOH8Q96SQ7 321 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 GON7Q9BXV9 100 aa15.2■□□□□ 0.02
COL17A1-202ENST00000369733 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.2■□□□□ 0.02
COL17A1-202ENST00000369733 C2orf78A6NCI8 922 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 GRXCR1A8MXD5 290 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 CTDSP2O14595 271 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 AXIN1O15169 862 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 SEC14L2O76054 403 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 GKN3PP0CG01 181 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 BPIP17213 487 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 SEC13P55735 322 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 WASH2PQ6VEQ5 465 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 TEX26Q8N6G2 289 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 NUP43Q8NFH3 380 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 THRSPQ92748 146 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 CLCC1Q96S66 551 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 ERVK-21P61565 698 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 RPS26P11Q5JNZ5 115 aaPredicted RBP15.19■□□□□ 0.02
COL17A1-202ENST00000369733 ZNF280BQ86YH2 543 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 C16orf78Q8WTQ4 265 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 WDR83Q9BRX9 315 aaKnown RBP15.19■□□□□ 0.02
COL17A1-202ENST00000369733 CACNG2Q9Y698 323 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 NPR2P20594 1047 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 ACTR1BP42025 376 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 CTBP2P56545 445 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 ACTR1AP61163 376 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 COL28A1Q2UY09 1125 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 CDKL4Q5MAI5 379 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 PYHIN1Q6K0P9 492 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 TRAM1L1Q8N609 369 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 FKBP10Q96AY3 582 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 TEPSINQ96N21 525 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 DGAT2Q96PD7 388 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 F2RL3Q96RI0 385 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 E7EQ34 232 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 GSTM4Q03013 218 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 STEAP3Q658P3 488 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 DUS1LQ6P1R4 473 aaKnown RBP15.19■□□□□ 0.02
COL17A1-202ENST00000369733 FAM83FQ8NEG4 500 aaPredicted RBP15.19■□□□□ 0.02
COL17A1-202ENST00000369733 ANKK1Q8NFD2 765 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.19■□□□□ 0.02
COL17A1-202ENST00000369733 RANGRFQ9HD47 186 aaPredicted RBP15.19■□□□□ 0.02
COL17A1-202ENST00000369733 Q9N2J8 555 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 BTNL2Q9UIR0 455 aa15.19■□□□□ 0.02
COL17A1-202ENST00000369733 SOX30O94993 753 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 FXYD6P3P58550 94 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 VAMP2P63027 116 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 IRAK1BP1Q5VVH5 260 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 TMPRSS12Q86WS5 348 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 BEST3Q8N1M1 668 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 OR5T3Q8NGG3 340 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 OR52P1PQ8NH57 321 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 CD300LFQ8TDQ1 290 aa15.18■□□□□ 0.02
COL17A1-202ENST00000369733 GTF2H4Q92759 462 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms