RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 NEK2P51955 445 aa14.71□□□□□ -0.05
CKS1B-202ENST00000368436 TBCELQ5QJ74 424 aa14.71□□□□□ -0.05
CKS1B-202ENST00000368436 ARSKQ6UWY0 536 aa14.71□□□□□ -0.05
CKS1B-202ENST00000368436 SEM1Q6ZVN7 128 aa14.71□□□□□ -0.05
CKS1B-202ENST00000368436 GOLGA7Q7Z5G4 137 aa14.71□□□□□ -0.05
CKS1B-202ENST00000368436 NUDT13Q86X67 352 aa14.71□□□□□ -0.05
CKS1B-202ENST00000368436 ULK2Q8IYT8 1036 aa14.71□□□□□ -0.05
CKS1B-202ENST00000368436 TAGAPQ8N103 731 aa14.71□□□□□ -0.05
CKS1B-202ENST00000368436 WDR41Q9HAD4 459 aa14.71□□□□□ -0.05
CKS1B-202ENST00000368436 CXorf21Q9HAI6 301 aa14.71□□□□□ -0.05
CKS1B-202ENST00000368436 B4GALT7Q9UBV7 327 aa14.71□□□□□ -0.05
CKS1B-202ENST00000368436 IKBKGQ9Y6K9 419 aa14.71□□□□□ -0.05
CKS1B-202ENST00000368436 C2orf92A0A1B0GVN3 265 aa14.7□□□□□ -0.06
CKS1B-202ENST00000368436 HSPB2A8KAH6 182 aa14.7□□□□□ -0.06
CKS1B-202ENST00000368436 CAPN14A8MX76 684 aa14.7□□□□□ -0.06
CKS1B-202ENST00000368436 PGRMC2O15173 223 aa14.7□□□□□ -0.06
CKS1B-202ENST00000368436 CTAG2O75638 210 aa14.7□□□□□ -0.06
CKS1B-202ENST00000368436 ZWINTO95229 277 aa14.7□□□□□ -0.06
CKS1B-202ENST00000368436 LRATO95237 230 aa14.7□□□□□ -0.06
CKS1B-202ENST00000368436 SIX3O95343 332 aaPredicted RBP14.7□□□□□ -0.06
CKS1B-202ENST00000368436 CLDN9O95484 217 aa14.7□□□□□ -0.06
CKS1B-202ENST00000368436 SSTR4P31391 388 aa14.7□□□□□ -0.06
CKS1B-202ENST00000368436 HSPB2Q16082 182 aa14.7□□□□□ -0.06
CKS1B-202ENST00000368436 OR52E8Q6IFG1 317 aa14.7□□□□□ -0.06
CKS1B-202ENST00000368436 KLC3Q6P597 504 aa14.7□□□□□ -0.06
CKS1B-202ENST00000368436 ZNF615Q8N8J6 731 aa14.7□□□□□ -0.06
CKS1B-202ENST00000368436 JSRP1Q96MG2 331 aaPredicted RBP14.7□□□□□ -0.06
CKS1B-202ENST00000368436 DOHHQ9BU89 302 aa14.7□□□□□ -0.06
CKS1B-202ENST00000368436 A0A1W2PS29 197 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 AHRRA9YTQ3 701 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 SYT5O00445 386 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 OR7A17O14581 309 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 TP53I11O14683 189 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 SEMA3DO95025 777 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 EPPINO95925 133 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 ALDOAP04075 364 aaKnown RBP14.69□□□□□ -0.06
CKS1B-202ENST00000368436 ART1P52961 327 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 CRYZQ08257 329 aaKnown RBP14.69□□□□□ -0.06
CKS1B-202ENST00000368436 FUT7Q11130 342 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 DUSP8Q13202 625 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 RPS6KA2Q15349 733 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 TECRLQ5HYJ1 363 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 TMEM198Q66K66 360 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 TMEM64Q6YI46 380 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 ZNF572Q7Z3I7 529 aaPredicted RBP14.69□□□□□ -0.06
CKS1B-202ENST00000368436 WDR53Q7Z5U6 358 aaPredicted RBP14.69□□□□□ -0.06
CKS1B-202ENST00000368436 LIX1Q8N485 282 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 SPPL2AQ8TCT8 520 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 NRGNQ92686 78 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 DIO2Q92813 273 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 ADIPOR1Q96A54 375 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 NTNG2Q96CW9 530 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 ZNF597Q96LX8 424 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 SECISBP2Q96T21 854 aaKnown RBP14.69□□□□□ -0.06
CKS1B-202ENST00000368436 SERPINI1Q99574 410 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 ANGPTL4Q9BY76 406 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 UBQLN3Q9H347 655 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 NOL11Q9H8H0 719 aaKnown RBP14.69□□□□□ -0.06
CKS1B-202ENST00000368436 ZDHHC18Q9NUE0 388 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 CPSF2Q9P2I0 782 aaKnown RBP14.69□□□□□ -0.06
CKS1B-202ENST00000368436 NPFFR2Q9Y5X5 522 aa14.69□□□□□ -0.06
CKS1B-202ENST00000368436 SETD2Q9BYW2 2564 aaPredicted RBP14.69□□□□□ -0.06
CKS1B-202ENST00000368436 FAM221AA4D161 298 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 SNX4O95219 450 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 GBAP04062 536 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 HPNP05981 417 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 CT62P0C5K7 136 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 GDF1P27539 372 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 PIK3R1P27986 724 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 TYK2P29597 1187 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 CASQ1P31415 396 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 CEACAM8P31997 349 aaPredicted RBP14.68□□□□□ -0.06
CKS1B-202ENST00000368436 PEX19P40855 299 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 TRPC1P48995 793 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 SERPINB8P50452 374 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 IST1P53990 364 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 FBXW4P57775 412 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 FNDC7Q5VTL7 733 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 ZZZ3Q8IYH5 903 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 PLD6Q8N2A8 252 aaKnown RBP14.68□□□□□ -0.06
CKS1B-202ENST00000368436 RELL2Q8NC24 303 aaPredicted RBP14.68□□□□□ -0.06
CKS1B-202ENST00000368436 OR4K14Q8NGD5 310 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 OR52B6Q8NGF0 335 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 MRRFQ96E11 262 aaKnown RBP14.68□□□□□ -0.06
CKS1B-202ENST00000368436 CDK15Q96Q40 435 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 TIMP4Q99727 224 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 NTMT1Q9BV86 223 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 OR10A5Q9H207 317 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 TEX10Q9NXF1 929 aaPredicted RBP14.68□□□□□ -0.06
CKS1B-202ENST00000368436 DNAJB12Q9NXW2 375 aaKnown RBP14.68□□□□□ -0.06
CKS1B-202ENST00000368436 ADAM29Q9UKF5 820 aa14.68□□□□□ -0.06
CKS1B-202ENST00000368436 C15orf38-AP3S2A0A0A6YYH1 394 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 TIMP3P35625 211 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 KIR2DL3P43628 341 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 CDK9P50750 372 aaKnown RBP14.67□□□□□ -0.06
CKS1B-202ENST00000368436 ETF1P62495 437 aaKnown RBP14.67□□□□□ -0.06
CKS1B-202ENST00000368436 FBXL19-AS1Q494R0 122 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 ACSF3Q4G176 576 aaPredicted RBP14.67□□□□□ -0.06
CKS1B-202ENST00000368436 NHSL2Q5HYW2 709 aa14.67□□□□□ -0.06
CKS1B-202ENST00000368436 C10orf62Q5T681 223 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms