RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 TAS2R3Q9NYW6 316 aa1.73□□□□□ -2.13
RNU4-42P-201ENST00000364738 SENP1Q9P0U3 644 aa1.73□□□□□ -2.13
RNU4-42P-201ENST00000364738 ACTR3BQ9P1U1 418 aa1.73□□□□□ -2.13
RNU4-42P-201ENST00000364738 FAM153AQ9UHL3 310 aa1.73□□□□□ -2.13
RNU4-42P-201ENST00000364738 SNX6Q9UNH7 406 aa1.73□□□□□ -2.13
RNU4-42P-201ENST00000364738 PADI2Q9Y2J8 665 aa1.73□□□□□ -2.13
RNU4-42P-201ENST00000364738 WBP11Q9Y2W2 641 aaKnown RBP1.73□□□□□ -2.13
RNU4-42P-201ENST00000364738 COMMD3-BMI1R4GMX3 469 aa1.73□□□□□ -2.13
RNU4-42P-201ENST00000364738 NPATQ14207 1427 aa1.73□□□□□ -2.13
RNU4-42P-201ENST00000364738 RSF1Q96T23 1441 aaPredicted RBP1.73□□□□□ -2.13
RNU4-42P-201ENST00000364738 RRBP1Q9P2E9 1410 aaKnown RBP1.73□□□□□ -2.13
RNU4-42P-201ENST00000364738 IGSF1Q8N6C5 1336 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 IGHV3-38A0A0C4DH36 116 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 RNF103-CHMP3A0A140T963 221 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ARHGEF37A1IGU5 675 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 OR2A25A4D2G3 310 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 PI4KAP2A4QPH2 592 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 PGPEP1LA6NFU8 196 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ZSCAN5CA6NGD5 496 aaPredicted RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 MIF4GDA9UHW6 222 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CENPBD1B2RD01 187 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 PTGES3LE9PB15 166 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 K7ERQ8 282 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 RNF103O00237 685 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 HIP1O00291 1037 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 SLC1A7O00341 560 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 TRAFD1O14545 582 aaPredicted RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CTDSP2O14595 271 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 XPO1O14980 1071 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ZSCAN12O43309 604 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 GATCO43716 136 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 STX10O60499 249 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 FMO6PO60774 539 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 MYO1DO94832 1006 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 GGPS1O95749 300 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 GAS8O95995 478 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 PNPP00491 289 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 IGHV2-70P01814 119 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 SNRPAP09012 282 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 GSTA2P09210 222 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 HMOX1P09601 288 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 PABPC4LP0CB38 370 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 MYBL1P10243 752 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 PRPS2P11908 318 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CCDC130P13994 396 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CPA3P15088 417 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 MYOGP15173 224 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ZNF19P17023 458 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 AADACP22760 399 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 GLRA2P23416 452 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 DNASE1P24855 282 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 MPZP25189 248 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 RRM2P31350 389 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ACAA2P42765 397 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 POU3F4P49335 361 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CCR3P51677 355 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 NDST2P52849 883 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 GBX2P52951 348 aaPredicted RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 SLC12A3P55017 1021 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 STX17P56962 302 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 DCDC1P59894 354 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 SRP54P61011 504 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ARF3P61204 181 aaPredicted RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 PSMC5P62195 406 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ARF1P84077 181 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 PRKCEQ02156 737 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 SMARCB1Q12824 385 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CDC20Q12834 499 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 AIMP1Q12904 312 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 STK4Q13043 487 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CAMK2DQ13557 499 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 TRA2AQ13595 282 aaKnown RBP eCLIP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CUL4AQ13619 759 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 KIAA0141Q14154 515 aaPredicted RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 RCN2Q14257 317 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 LASP1Q14847 261 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ARHGAP19Q14CB8 494 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 MORF4L2Q15014 288 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 KRT31Q15323 416 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ZMYND11Q15326 602 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 TRADDQ15628 312 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 KLHL38Q2WGJ6 581 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 RAB41Q5JT25 222 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 C1orf141Q5JVX7 400 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CLVS2Q5SYC1 327 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ATAD3CQ5T2N8 411 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 KHDRBS2Q5VWX1 349 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 RPUSD3Q6P087 351 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CASC4Q6P4E1 433 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CYB5D1Q6P9G0 228 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 BLOC1S2Q6QNY1 142 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CLEC2AQ6UVW9 174 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 TPGS1Q6ZTW0 290 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 USP50Q70EL3 339 aaPredicted RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 TRMT10CQ7L0Y3 403 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 TAF8Q7Z7C8 310 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 ASPGQ86U10 573 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 PRPF39Q86UA1 669 aaKnown RBP1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 SLC22A9Q8IVM8 553 aa1.72□□□□□ -2.13
RNU4-42P-201ENST00000364738 CDKL3Q8IVW4 592 aaPredicted RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms