RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 TRBV5-3A0A0A0MS03 114 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 DNAJC8O75937 253 aaPredicted RBP19.34■□□□□ 0.69
SHISA4-201ENST00000362011 TNFSF15O95150 251 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 DLGAP3O95886 979 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 ALBP02768 609 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 PTPN6P29350 595 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 SOAT1P35610 550 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 BIKQ13323 160 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 SERTAD2Q14140 314 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 MINDY4Q4G0A6 757 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 BNC2Q6ZN30 1099 aaPredicted RBP19.34■□□□□ 0.69
SHISA4-201ENST00000362011 KIF2BQ8N4N8 673 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 C7orf57Q8NEG2 295 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 STT3BQ8TCJ2 826 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 FGF11Q92914 225 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 ANKRD27Q96NW4 1050 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 ASH1LQ9NR48 2969 aaKnown RBP19.34■□□□□ 0.69
SHISA4-201ENST00000362011 SLC6A13Q9NSD5 602 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 SLC25A37Q9NYZ2 338 aa19.34■□□□□ 0.69
SHISA4-201ENST00000362011 PRPF19Q9UMS4 504 aaKnown RBP19.34■□□□□ 0.69
SHISA4-201ENST00000362011 C9J4A7 227 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 GSC2O15499 205 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 ZGLP1P0C6A0 271 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 UQCRC2P22695 453 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 CDK9P50750 372 aaKnown RBP19.33■□□□□ 0.69
SHISA4-201ENST00000362011 GABREP78334 506 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 RUNDC3AQ59EK9 446 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 MLIPQ5VWP3 458 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 LCN10Q6JVE6 187 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 C6orf15Q6UXA7 325 aaPredicted RBP19.33■□□□□ 0.69
SHISA4-201ENST00000362011 MSRB3Q8IXL7 192 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 PSMA8Q8TAA3 256 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 MCUR1Q96AQ8 359 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 PTCHD1Q96NR3 888 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 PELOQ9BRX2 385 aaKnown RBP19.33■□□□□ 0.69
SHISA4-201ENST00000362011 CADM1Q9BY67 442 aaKnown RBP19.33■□□□□ 0.69
SHISA4-201ENST00000362011 ALOXE3Q9BYJ1 711 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 CHST8Q9H2A9 424 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 SLC26A1Q9H2B4 701 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 CXorf36Q9H7Y0 433 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 POLR1BQ9H9Y6 1135 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 SPAG4Q9NPE6 437 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 NECTIN3Q9NQS3 549 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 SEMA3GQ9NS98 782 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 SIRT3Q9NTG7 399 aaPredicted RBP19.33■□□□□ 0.69
SHISA4-201ENST00000362011 ERVK-11Q9UQG0 969 aa19.33■□□□□ 0.69
SHISA4-201ENST00000362011 TEX51A0A1B0GUA7 166 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 MYOCOSA0A1B0GUC4 107 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 SYNDIG1LA6NDD5 238 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 TGFBR3LH3BV60 316 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 OR10H2O60403 315 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 BRINP1O60477 761 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 ZIC2O95409 532 aaPredicted RBP19.32■□□□□ 0.68
SHISA4-201ENST00000362011 ATP1B1P05026 303 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 SLC35E2P0CK97 266 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 MAOAP21397 527 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 NT5EP21589 574 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 PPIBP23284 216 aaKnown RBP19.32■□□□□ 0.68
SHISA4-201ENST00000362011 RHAGQ02094 409 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 GAB1Q13480 694 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 NKG7Q16617 165 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 CPZQ66K79 652 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 NANOGP8Q6NSW7 305 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 PCSK4Q6UW60 755 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 PRSS58Q8IYP2 241 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 ARHGAP24Q8N264 748 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 OR8J3Q8NGG0 315 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 OR9A2Q8NGT5 310 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 DGAT2Q96PD7 388 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 SH3GL1Q99961 368 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 CPPED1Q9BRF8 314 aaPredicted RBP19.32■□□□□ 0.68
SHISA4-201ENST00000362011 SLC35A5Q9BS91 424 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 THTPAQ9BU02 230 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 NANOGQ9H9S0 305 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 FOXJ2Q9P0K8 574 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 MKL2Q9ULH7 1088 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 L3MBTL1Q9Y468 752 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 SNX8Q9Y5X2 465 aa19.32■□□□□ 0.68
SHISA4-201ENST00000362011 OR2W5A6NFC9 320 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 VSTM2BA6NLU5 285 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 CLIC1O00299 241 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 SLITRK5O94991 958 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 CCNYL3P0C7X3 344 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 SLC6A2P23975 617 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 PGM1P36871 562 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 SLC7A2P52569 658 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 TLE3Q04726 772 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 MAP7Q14244 749 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 LTB4RQ15722 352 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 TBC1D25Q3MII6 688 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 SPDYE7PQ495Y7 208 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 C6orf163Q5TEZ5 329 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 MRPL14Q6P1L8 145 aaKnown RBP19.31■□□□□ 0.68
SHISA4-201ENST00000362011 FAM198BQ6UWH4 519 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 TMEM64Q6YI46 380 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 ZNF517Q6ZMY9 492 aaPredicted RBP19.31■□□□□ 0.68
SHISA4-201ENST00000362011 GPR155Q7Z3F1 870 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 ST13P4Q8IZP2 240 aaPredicted RBP19.31■□□□□ 0.68
SHISA4-201ENST00000362011 PLPP5Q8NEB5 264 aa19.31■□□□□ 0.68
SHISA4-201ENST00000362011 SFXN5Q8TD22 340 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms