RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 STEAP2Q8NFT2 490 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 GMPPAQ96IJ6 420 aaPredicted RBP5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 CAPZA3Q96KX2 299 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 POTEKPQ9BYX7 375 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 DDX47Q9H0S4 455 aaKnown RBP5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 GOLGA8TH3BQL2 631 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 ETV2O00321 342 aaPredicted RBP5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 NRDCO43847 1150 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 PPM1BO75688 479 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 ABCB1P08183 1280 aaPredicted RBP5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 CDH1P12830 882 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 SRD5A1P18405 259 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 HNF1AP20823 631 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 DRD5P21918 477 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 SCGB2A2Q13296 93 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 CCDC38Q502W7 563 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 FAM120AOSQ5T036 256 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 ENPP6Q6UWR7 440 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 SRFBP1Q8NEF9 429 aaKnown RBP5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 FBXW5Q969U6 566 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 RHBDF1Q96CC6 855 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 ZNF778Q96MU6 729 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 AIF1LQ9BQI0 150 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 LMBRD1Q9NUN5 540 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 ABCG2Q9UNQ0 655 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 RNF115Q9Y4L5 304 aa5.37□□□□□ -1.55
CDC42SE2-201ENST00000360515 OR2W5A6NFC9 320 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 OR6C70A6NIJ9 312 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 NDUFS4O43181 175 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 B3GALT2O43825 422 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 ZIC3O60481 467 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 COX5AP20674 150 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 GCKP35557 465 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 LSM11P83369 360 aaKnown RBP eCLIP5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 TBX2Q13207 712 aaPredicted RBP5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 TSC22D1Q15714 1073 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 FAM166AQ6J272 317 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 METTL2BQ6P1Q9 378 aaKnown RBP5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 BEND4Q6ZU67 534 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 MICALCLQ6ZW33 695 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 MCUQ8NE86 351 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 UBTD2Q8WUN7 234 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 PGM2Q96G03 612 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 C6orf203Q9P0P8 240 aaPredicted RBP5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 FAM8A1Q9UBU6 413 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 FAM170AA1A519 330 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 NIPSNAP2O75323 286 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 SOD3P08294 240 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 SLC35E2BP0CK96 405 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 SLC35E2P0CK97 266 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 HIST1H1TP22492 207 aaPredicted RBP5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 HNRNPH1P31943 449 aaKnown RBP5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 PIGAP37287 484 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 LAPTM5Q13571 262 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 DEFB134Q4QY38 66 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 HECTD2Q5U5R9 776 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 AAGABQ6PD74 315 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 SHISA2Q6UWI4 295 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 STAC2Q6ZMT1 411 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 FAM214BQ7L5A3 538 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 PACS2Q86VP3 889 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 GABRG1Q8N1C3 465 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 C2orf73Q8N5S3 287 aaPredicted RBP5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 OR10G3Q8NGC4 313 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 GSDMBQ8TAX9 411 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 SLC44A1Q8WWI5 657 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 SPNS1Q9H2V7 528 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 KLHL31Q9H511 634 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 COPS7AQ9UBW8 275 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 ANAPC5Q9UJX4 755 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 FBXW2Q9UKT8 454 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 ATRQ13535 2644 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 ZCWPW2A0A1B0GU75 182 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 PSMD12O00232 456 aaPredicted RBP5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 LMX1BO60663 402 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 NDUFS3O75489 264 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 NGFRP08138 427 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 HILS1P60008 231 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 ZNF844Q08AG5 666 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 MGAT2Q10469 447 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 MAP4K2Q12851 820 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 UBE2R2Q712K3 238 aaPredicted RBP5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 TCAIMQ8N3R3 496 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 ZNF321PQ8N8H1 164 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 C2CD4AQ8NCU7 369 aaPredicted RBP5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 AKAP1Q92667 903 aaKnown RBP eCLIP5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 SNF8Q96H20 258 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 ADAD1Q96M93 576 aaKnown RBP5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 APOL2Q9BQE5 337 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 RHNO1Q9BSD3 238 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 BEX2Q9BXY8 128 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 ZNF717Q9BY31 904 aaPredicted RBP5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 ALOXE3Q9BYJ1 711 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 NAT10Q9H0A0 1025 aaKnown RBP5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 RACGAP1Q9H0H5 632 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 TSPYL1Q9H0U9 437 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 CBLN4Q9NTU7 201 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 PAK5Q9P286 719 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 B3GALT5Q9Y2C3 310 aa5.36□□□□□ -1.55
CDC42SE2-201ENST00000360515 RYR3Q15413 4870 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms