RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 KIF12Q96FN5 646 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 FAHD2AQ96GK7 314 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 BARD1Q99728 777 aaKnown RBP4.28□□□□□ -1.72
PTPN22-201ENST00000359785 ARHGDIGQ99819 225 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 C16orf70Q9BSU1 422 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 SLC12A9Q9BXP2 914 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 SPATC1LQ9H0A9 340 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 MAGEH1Q9H213 219 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 SMDT1Q9H4I9 107 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 SLC32A1Q9H598 525 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 CCDC86Q9H6F5 360 aaKnown RBP4.28□□□□□ -1.72
PTPN22-201ENST00000359785 PDGFCQ9NRA1 345 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 GPATCH2LQ9NWQ4 482 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 SDHAF2Q9NX18 166 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 MGAT4CQ9UBM8 478 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 IL20RAQ9UHF4 553 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 ETV7Q9Y603 341 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 MTCH2Q9Y6C9 303 aa4.28□□□□□ -1.72
PTPN22-201ENST00000359785 A0A1W2PPC1 479 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 PMS2P1A4D2B8 440 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 PRSS44E7EML9 344 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 OGG1O15527 345 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 LRRTM2O43300 516 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 PKMP14618 531 aaKnown RBP4.27□□□□□ -1.73
PTPN22-201ENST00000359785 GABRA1P14867 456 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 NCK1P16333 377 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 SDC1P18827 310 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 GTF2E2P29084 291 aaKnown RBP4.27□□□□□ -1.73
PTPN22-201ENST00000359785 FMO3P31513 532 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 MSX2P35548 267 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-201ENST00000359785 CSNK1EP49674 416 aaKnown RBP4.27□□□□□ -1.73
PTPN22-201ENST00000359785 CLK1P49759 484 aaKnown RBP4.27□□□□□ -1.73
PTPN22-201ENST00000359785 RAE1P78406 368 aaKnown RBP4.27□□□□□ -1.73
PTPN22-201ENST00000359785 CACNG1Q06432 222 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 PICALMQ13492 652 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 CDH18Q13634 790 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 PTPRCAPQ14761 206 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 UGT8Q16880 541 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 FAM214AQ32MH5 1076 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 ANKRD39Q53RE8 183 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 PLEKHS1Q5SXH7 462 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 METTL11BQ5VVY1 283 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 ANKRD54Q6NXT1 300 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 SPESP1Q6UW49 350 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 CASP12Q6UXS9 341 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 ADGRG2Q8IZP9 1017 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 MS4A15Q8N5U1 240 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 NAT16Q8N8M0 369 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 DBF4BQ8NFT6 615 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 OR11H4Q8NGC9 324 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 OR5W2Q8NH69 310 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 BRIX1Q8TDN6 353 aaKnown RBP4.27□□□□□ -1.73
PTPN22-201ENST00000359785 ST8SIA4Q92187 359 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 NEURL3Q96EH8 262 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 C10orf90Q96M02 699 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 TEAD3Q99594 435 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 ACPTQ9BZG2 426 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 DCAF16Q9NXF7 216 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 UBP1Q9NZI7 540 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 AKAP7Q9P0M2 348 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-201ENST00000359785 SLC2A6Q9UGQ3 507 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 NUFIP1Q9UHK0 495 aaKnown RBP4.27□□□□□ -1.73
PTPN22-201ENST00000359785 SSR3Q9UNL2 185 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 GPSM3Q9Y4H4 160 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 ATG2AQ2TAZ0 1938 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 A0A087WZ62 844 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 A0A1B0GW55 424 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 MTMR11A4FU01 709 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 SULT1C2O00338 296 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 FMO6PO60774 539 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 SOCS5O75159 536 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 SIX3O95343 332 aaPredicted RBP4.27□□□□□ -1.73
PTPN22-201ENST00000359785 PRAMEF12O95522 483 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 ALDH1A1P00352 501 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 PRLP01236 227 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 DUX4L2P0CJ85 424 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 DUX4L3P0CJ86 424 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 DUX4L4P0CJ87 422 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 DUX4L5P0CJ88 424 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 DUX4L6P0CJ89 424 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 DUX4L7P0CJ90 424 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 TFPIP10646 304 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 CBR1P16152 277 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 FSHRP23945 695 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 PSMB9P28065 219 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 PDHA2P29803 388 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 EVI2BP34910 448 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 GPR176Q14439 515 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 RGNQ15493 299 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 MAPK11Q15759 364 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 NTRK2Q16620 822 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 MPEG1Q2M385 716 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 AP5B1Q2VPB7 878 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 FAM26DQ5JW98 314 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 CASC4Q6P4E1 433 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 RASSF6Q6ZTQ3 369 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 C16orf62Q7Z3J2 963 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 GPR65Q8IYL9 337 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 ATG16L2Q8NAA4 619 aa4.27□□□□□ -1.73
PTPN22-201ENST00000359785 OR10G2Q8NGC3 310 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms