RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ANKRD28O15084 1053 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 GBAP04062 536 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 LIFP15018 202 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 FAM98BQ52LJ0 330 aaKnown RBP8.64□□□□□ -1.03
UPF2-202ENST00000357604 LRRC23Q53EV4 343 aaPredicted RBP8.64□□□□□ -1.03
UPF2-202ENST00000357604 OR4F3Q6IEY1 312 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 PLPP5Q8NEB5 264 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 OR52R1Q8NGF1 315 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 APIPQ96GX9 242 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 Q9H521 79 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 AIG1Q9NVV5 245 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 KLK13Q9UKR3 277 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 CBLCQ9ULV8 474 aa8.64□□□□□ -1.03
UPF2-202ENST00000357604 LOC100653049A0A140TA62 436 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 FITM1A5D6W6 292 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 KRT34O76011 436 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 RECKO95980 971 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 PABPC4LP0CB38 370 aaKnown RBP8.63□□□□□ -1.03
UPF2-202ENST00000357604 ZIC1Q15915 447 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 FLYWCH1Q4VC44 716 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 REP15Q6BDI9 236 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 SLC30A6Q6NXT4 461 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 DBX2Q6ZNG2 339 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 PLEKHM3Q6ZWE6 761 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 OR4K1Q8NGD4 311 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 WDR20Q8TBZ3 569 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 OR2A5Q96R48 311 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 FAM220BPB1ANY3 271 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 ADRB1P08588 477 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 PRPH2P23942 346 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 NR0B1P51843 470 aaKnown RBP8.63□□□□□ -1.03
UPF2-202ENST00000357604 TAS2R41P59536 307 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 SCARB2Q14108 478 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 ENPP6Q6UWR7 440 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 IFNEQ86WN2 208 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 RPS19BP1Q86WX3 136 aaKnown RBP8.63□□□□□ -1.03
UPF2-202ENST00000357604 SLC2A12Q8TD20 617 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 NSMCE2Q96MF7 247 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 HBEGFQ99075 208 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 HNRNPRO43390 633 aaKnown RBP8.63□□□□□ -1.03
UPF2-202ENST00000357604 SUV39H1O43463 412 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 IL7RP16871 459 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 CXCR1P25024 350 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 IL10RAQ13651 578 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 CBFBQ13951 182 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 KLHL26Q53HC5 615 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 ARMC8Q8IUR7 673 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 PMEPA1Q969W9 287 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 LCORQ96JN0 433 aaPredicted RBP8.63□□□□□ -1.03
UPF2-202ENST00000357604 SLC45A3Q96JT2 553 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 BTBD2Q9BX70 525 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 TGIF2Q9GZN2 237 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 OR10A5Q9H207 317 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 WDR55Q9H6Y2 383 aaPredicted RBP8.63□□□□□ -1.03
UPF2-202ENST00000357604 CNIH4Q9P003 139 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 MYO1GB0I1T2 1018 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 H0Y3Z8 333 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 LDB3O75112 727 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 ALDH6A1Q02252 535 aaKnown RBP8.63□□□□□ -1.03
UPF2-202ENST00000357604 ASB18Q6ZVZ8 466 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 GALNT16Q8N428 558 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 STON2Q8WXE9 905 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 MACROD1Q9BQ69 325 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 FNDC11Q9BVV2 318 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 C12orf65Q9H3J6 166 aaKnown RBP8.63□□□□□ -1.03
UPF2-202ENST00000357604 ALKBH4Q9NXW9 302 aa8.63□□□□□ -1.03
UPF2-202ENST00000357604 CFAP73A6NFT4 308 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 DBIP07108 87 aaKnown RBP8.62□□□□□ -1.03
UPF2-202ENST00000357604 SLC7A1P30825 629 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 MTX3Q5HYI7 312 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 SLC22A10Q63ZE4 541 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 IGF2-ASQ6U949 168 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 NUP54Q7Z3B4 507 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 CYP4Z2PQ8N1L4 340 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 OR5M3Q8NGP4 307 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 OR1N1Q8NGS0 311 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 OR14L1PQ8NHC6 308 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 TM4SF18Q96CE8 201 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 DDIT4LQ96D03 193 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 TPD52L3Q96J77 140 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 CCDC134Q9H6E4 229 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 KIF26AQ9ULI4 1882 aaPredicted RBP8.62□□□□□ -1.03
UPF2-202ENST00000357604 SCELO95171 688 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 UMPSP11172 480 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 CD247P20963 164 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 GDF1P27539 372 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 PEBP1P30086 187 aaKnown RBP8.62□□□□□ -1.03
UPF2-202ENST00000357604 NKG7Q16617 165 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 PRTGQ2VWP7 1150 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 SLC9B1Q4ZJI4 515 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 KANSL1Q7Z3B3 1105 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 OR4N5Q8IXE1 308 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 OR9A2Q8NGT5 310 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 THAP3Q8WTV1 239 aaPredicted RBP8.62□□□□□ -1.03
UPF2-202ENST00000357604 TESCQ96BS2 214 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 MRPL48Q96GC5 212 aaKnown RBP8.62□□□□□ -1.03
UPF2-202ENST00000357604 PLEKHA8Q96JA3 519 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 BAIAP2L1Q9UHR4 511 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 EMCNQ9ULC0 261 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 SLC35A3Q9Y2D2 325 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms