RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 IL33O95760 270 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 CLIC3O95833 236 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 CKMT1AP12532 417 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 ATP1B2P14415 290 aaPredicted RBP12.31□□□□□ -0.44
SMC4-202ENST00000357388 RAB4AP20338 218 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 BDKRB2P30411 391 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 CDKN1CP49918 316 aaPredicted RBP12.31□□□□□ -0.44
SMC4-202ENST00000357388 RAB31Q13636 194 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 LIPJQ5W064 366 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 PRRT2Q7Z6L0 340 aaPredicted RBP12.31□□□□□ -0.44
SMC4-202ENST00000357388 OR9I1Q8NGQ6 314 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 PROKR1Q8TCW9 393 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 TSGA13Q96PP4 275 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 KIF25Q9UIL4 384 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 NFS1Q9Y697 457 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 MEGF11A6BM72 1044 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 HHLA1C9JL84 531 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 BLOC1S5-TXNDC5H3BN57 136 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 ADAM10O14672 748 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 KCNJ13O60928 360 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 ADAP00813 363 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 SOX2P48431 317 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 CLCNKAP51800 687 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 ITPRIPL2Q3MIP1 535 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 SIRPB2Q5JXA9 342 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 MTMR14Q8NCE2 650 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 OR5H2Q8NGV7 314 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 KLHDC7BQ96G42 594 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 ZBED3Q96IU2 234 aaPredicted RBP12.31□□□□□ -0.44
SMC4-202ENST00000357388 TMEM181Q9P2C4 612 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 CDC7O00311 574 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 NDUFS4O43181 175 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 LILRB5O75023 590 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 ALPIP09923 528 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 PPP1R8Q12972 351 aaKnown RBP12.31□□□□□ -0.44
SMC4-202ENST00000357388 FAM214AQ32MH5 1076 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 KCNIP4Q6PIL6 250 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 IDO2Q6ZQW0 420 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 DCP2Q8IU60 420 aaKnown RBP12.31□□□□□ -0.44
SMC4-202ENST00000357388 OR2AP1Q8NGE2 309 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 TMEM234Q8WY98 164 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 MYRFLQ96LU7 910 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 WDR6Q9NNW5 1121 aaKnown RBP12.31□□□□□ -0.44
SMC4-202ENST00000357388 SAGE1Q9NXZ1 904 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 SLC22A14Q9Y267 594 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 TRBV2A0A0J9YWF9 115 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 UNCXA6NJT0 531 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 ZNF850A8MQ14 1090 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 SLC16A5O15375 505 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 SLC22A5O76082 557 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 JUNP05412 331 aaKnown RBP12.31□□□□□ -0.44
SMC4-202ENST00000357388 HSD17B1P14061 328 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 NFATC2Q13469 925 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 RCAN2Q14206 197 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 PAFAH1B3Q15102 231 aaKnown RBP12.31□□□□□ -0.44
SMC4-202ENST00000357388 UGT3A2Q3SY77 523 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 CLVS2Q5SYC1 327 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 HES5Q5TA89 166 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 ZNF619Q8N2I2 560 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 TRAM1L1Q8N609 369 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 SIMC1Q8NDZ2 872 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 RNF128Q8TEB7 428 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 SLC25A44Q96H78 314 aaPredicted RBP12.31□□□□□ -0.44
SMC4-202ENST00000357388 G6PC3Q9BUM1 346 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 TSPAN10Q9H1Z9 355 aaPredicted RBP12.31□□□□□ -0.44
SMC4-202ENST00000357388 RLIMQ9NVW2 624 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 B4GALT7Q9UBV7 327 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 CLEC4EQ9ULY5 219 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 TCRBV7S3A2A0A539 114 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 SLC35F4A4IF30 521 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 OR6C74A6NCV1 312 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 AMY2AP04746 511 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 STSP08842 583 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 ASPAP45381 313 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 CLRN1P58418 232 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 FOXK1P85037 733 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 KCTD20Q7Z5Y7 419 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 ZFAND4Q86XD8 727 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 ZDHHC14Q8IZN3 488 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 SUMF2Q8NBJ7 301 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 DCUN1D4Q92564 292 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 DPEP3Q9H4B8 488 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 TLR9Q9NR96 1032 aa12.31□□□□□ -0.44
SMC4-202ENST00000357388 IRS2Q9Y4H2 1338 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 PIK3C2BO00750 1634 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 UPK3BL1B0FP48 263 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 UPK3BL2E5RIL1 263 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 LATO43561 262 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 ZNF254O75437 659 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 SCAF4O95104 1147 aaKnown RBP12.3□□□□□ -0.44
SMC4-202ENST00000357388 BMXP51813 675 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 NKX2-5P52952 324 aaPredicted RBP12.3□□□□□ -0.44
SMC4-202ENST00000357388 POU6F2P78424 691 aaPredicted RBP12.3□□□□□ -0.44
SMC4-202ENST00000357388 DCAF12L1Q5VU92 463 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 LILRB2Q8N423 598 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 HOXB13Q92826 284 aaPredicted RBP12.3□□□□□ -0.44
SMC4-202ENST00000357388 PTERQ96BW5 349 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 SCLYQ96I15 445 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 FGFBP2Q9BYJ0 223 aa12.3□□□□□ -0.44
SMC4-202ENST00000357388 OR51J1Q9H342 316 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms