RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 NMBRP28336 390 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 SLC5A2P31639 672 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 GABRA5P31644 462 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF558Q96NG5 402 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CNTNAP3BQ96NU0 1288 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 BRINP2Q9C0B6 783 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 FBXL4Q9UKA2 621 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 J3KR12 359 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 B3GALNT1O75752 331 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 FGFBP1Q14512 234 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 TOMM20Q15388 145 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 LIPKQ5VXJ0 399 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 PGM2L1Q6PCE3 622 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 KCNIP4Q6PIL6 250 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 LURAP1Q96LR2 239 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 B3GNT5Q9BYG0 378 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ANKRD36A6QL64 1941 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 LRRK1Q38SD2 2015 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 PIK3C2AO00443 1686 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 GAPDHSO14556 408 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CDK1P06493 297 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 PRKAR1BP31321 381 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 HTR3AP46098 478 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 RRAS2P62070 204 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 MZT1Q08AG7 82 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 RIN1Q13671 783 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF678Q5SXM1 525 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 TICAM1Q8IUC6 712 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CMTM1Q8IZ96 169 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 SRA1Q9HD15 236 aaKnown RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 Q9N2J8 555 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 SMPD4Q9NXE4 827 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 ABT1Q9ULW3 272 aaKnown RBP6.3□□□□□ -1.4
VPS13B-202ENST00000357162 PPP1R2P9O14990 202 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 G6PDP11413 515 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 AVPR1BP47901 424 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CRISP1P54107 249 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 C14orf28Q4W4Y0 310 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 NCBP2-AS2Q69YL0 99 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 GPR139Q6DWJ6 353 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 AADACL2Q6P093 401 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 RASGRP3Q8IV61 690 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 GALNT11Q8NCW6 608 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 PLCXD1Q9NUJ7 323 aa6.3□□□□□ -1.4
VPS13B-202ENST00000357162 CICQ96RK0 1608 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 A0A0U1RQJ8 604 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 PRAMEF11O60813 436 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 SLC22A5O76082 557 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 PGAM2P15259 253 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 BAK1Q16611 211 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 RNF212Q495C1 297 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 CNIH2Q6PI25 160 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 NDUFAF7Q7L592 441 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 OR2T4Q8NH00 348 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ASB17Q8WXJ9 295 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 UPF1Q92900 1129 aaKnown RBP eCLIP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF566Q969W8 418 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 COL26A1Q96A83 441 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 MALSU1Q96EH3 234 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 MFFQ9GZY8 342 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 SH2B3Q9UQQ2 575 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 SLC45A1Q9Y2W3 748 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 RGPD5Q99666 1765 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF623O75123 536 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 MPC1LP0DKB6 136 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 CHATP28329 748 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 DAOAP59103 153 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 DDX1Q92499 740 aaKnown RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 EMID1Q96A84 441 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 RBP7Q96R05 134 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 PCDHAC1Q9H158 963 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 SLC28A3Q9HAS3 691 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 RDH14Q9HBH5 336 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ZDHHC2Q9UIJ5 367 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 RIMS3Q9UJD0 308 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 ADAMTS6Q9UKP5 1117 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 RNF212BA8MTL3 300 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 GSRP00390 522 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 JUNP05412 331 aaKnown RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 SLC2A5P22732 501 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 CEBPGP53567 150 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 AVPI1Q5T686 147 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 KCNRGQ8N5I3 272 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 GLIS3Q8NEA6 775 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 METTL21AQ8WXB1 218 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 GLYATL1Q969I3 302 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 FBXL20Q96IG2 436 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 SLC25A32Q9H2D1 315 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 B3GAT2Q9NPZ5 323 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 LAMP5Q9UJQ1 280 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 OR2F2O95006 317 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 PIM1P11309 404 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 LAG3P18627 525 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 RGS19P49795 217 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 OR2F1Q13607 317 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 NHSL2Q5HYW2 709 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 FAM162BQ5T6X4 162 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 GPR149Q86SP6 731 aa6.29□□□□□ -1.4
VPS13B-202ENST00000357162 IFNLR1Q8IU57 520 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-202ENST00000357162 LRCH3Q96II8 777 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms