RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 H2BFMP0C1H6 154 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 CASRP41180 1078 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 PRKXP51817 358 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 ART1P52961 327 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 ZNF805Q5CZA5 627 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 NRG4Q8WWG1 115 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 NUFIP1Q9UHK0 495 aaKnown RBP14.19□□□□□ -0.14
CHD4-201ENST00000357008 ZCWPW2A0A1B0GU75 182 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 A0A1W2PQL4 384 aaPredicted RBP14.19□□□□□ -0.14
CHD4-201ENST00000357008 RAB3BP20337 219 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 DCTP40126 519 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 FAM198BQ6UWH4 519 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 SLC9B2Q86UD5 537 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 ZNF283Q8N7M2 679 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 SCGB1C1Q8TD33 95 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 HMGB4Q8WW32 186 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 SH3YL1Q96HL8 342 aaPredicted RBP14.19□□□□□ -0.14
CHD4-201ENST00000357008 SLC29A1Q99808 456 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 GPN2Q9H9Y4 310 aaPredicted RBP14.19□□□□□ -0.14
CHD4-201ENST00000357008 COCHO43405 550 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 CNR2P34972 360 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 ETV3P41162 512 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 TBPL1P62380 186 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 SLAMF1Q13291 335 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 PDSS1Q5T2R2 415 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 GPAT4Q86UL3 456 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 ZFP41Q8N8Y5 198 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 TMEM234Q8WY98 164 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 FUBP1Q96AE4 644 aaKnown RBP14.19□□□□□ -0.14
CHD4-201ENST00000357008 CERS4Q9HA82 394 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 FGF4P08620 206 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 GDI1P31150 447 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 KEAP1Q14145 624 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 EIF4HQ15056 248 aaKnown RBP14.19□□□□□ -0.14
CHD4-201ENST00000357008 UPP1Q16831 310 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 PROKR1Q8TCW9 393 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 ENPP5Q9UJA9 477 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 CLEC4EQ9ULY5 219 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 SLC45A1Q9Y2W3 748 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 ENPP4Q9Y6X5 453 aa14.19□□□□□ -0.14
CHD4-201ENST00000357008 LYRM1O43325 122 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 OSMP13725 252 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 ETFAP13804 333 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 TMEM205Q6UW68 189 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 ASB15Q8WXK1 588 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 LRIG1Q96JA1 1093 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 CNN2Q99439 309 aaKnown RBP14.18□□□□□ -0.14
CHD4-201ENST00000357008 PTGES2Q9H7Z7 377 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 IGSF5Q9NSI5 407 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 ASB6Q9NWX5 421 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 EDARQ9UNE0 448 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 HYKKA2RU49 373 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 KRBA1A5PL33 1030 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 ANHXE9PGG2 379 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 GSRP00390 522 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 LY6G5CQ5SRR4 150 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 IGFN1Q86VF2 1251 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 FTMTQ8N4E7 242 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 LEFTY1O75610 366 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 ERCC1P07992 297 aaPredicted RBP14.18□□□□□ -0.14
CHD4-201ENST00000357008 JAG1P78504 1218 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.18□□□□□ -0.14
CHD4-201ENST00000357008 ZNF486Q96H40 463 aaPredicted RBP14.18□□□□□ -0.14
CHD4-201ENST00000357008 HERPUD2Q9BSE4 406 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 OR8D2Q9GZM6 311 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.18□□□□□ -0.14
CHD4-201ENST00000357008 RXFP3Q9NSD7 469 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 JRKO75564 520 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 BPNT1O95861 308 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 PRMT2P55345 433 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 ERVPABLB-1P60509 514 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 ASPGQ86U10 573 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 TMEM156Q8N614 296 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 HUS1BQ8NHY5 278 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 NETO1Q8TDF5 533 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 ZNF597Q96LX8 424 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 PCYT2Q99447 389 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 PARPBPQ9NWS1 579 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 ASB4Q9Y574 426 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 INPPL1O15357 1258 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 AK1P00568 194 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 LCKP06239 509 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 ENDOUP21128 410 aaKnown RBP14.18□□□□□ -0.14
CHD4-201ENST00000357008 UQCRC1P31930 480 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 SGTBQ96EQ0 304 aa14.18□□□□□ -0.14
CHD4-201ENST00000357008 EIF5A2Q9GZV4 153 aaKnown RBP14.18□□□□□ -0.14
CHD4-201ENST00000357008 RAD51DO75771 328 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 PAK4O96013 591 aaPredicted RBP14.17□□□□□ -0.14
CHD4-201ENST00000357008 GALTP07902 379 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 S100PP25815 95 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 SOX9P48436 509 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 SNRPD2P62316 118 aaKnown RBP14.17□□□□□ -0.14
CHD4-201ENST00000357008 ZNF252P-AS1Q0IIN9 211 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 COMMD7Q86VX2 200 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 TFAP2CQ92754 450 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 PFDN5Q99471 154 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 A0A1W2PPL8 197 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 GRXCR2A6NFK2 248 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 C11orf98E9PRG8 122 aa14.17□□□□□ -0.14
CHD4-201ENST00000357008 CA12O43570 354 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms